Laxy Genomics Pipelines
active 2023-08-22 → 2026-07-30 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1074 days from 2023-08-22 to 2026-07-30. Pushes: 141 total, peak 8 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 16 total, peak 2 in a day. Comments: 7 total, peak 2 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| pansapiens | 153 | 134 | 0 | 5 |
| cursor[bot] | 2 | 1 | 0 | 1 |
| pfh | 1 | 0 | 0 | 1 |
| amdouek | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#60pansapiens2026-03-25 02:18Rename laxy_downloader.downloader package
- Issue#291pansapiens2025-08-05 07:38Laxy + nf-core/rnaseq v3.18 - missing BAMs when --with-umi flag used ?
- Issue comment#292cursor[bot]2025-08-05 07:10Update run_job.sh with correct flags
- Issue#291pansapiens2025-08-05 05:08Laxy + nf-core/rnaseq v3.18 - missing BAMs when --with-umi flag used ?
- Issue#290pansapiens2025-07-22 00:22ENA search in UI expects sample accession SAMN.* to exist
- Issue#284pansapiens2025-07-09 02:09is_paired.py pair-end filename detection script failing
- Issue#289pansapiens2025-02-14 05:22External FASTA (and GTF/GFF) files with DOS/Windows line endings break nf-core/rnaseq
- Issue#288pansapiens2025-02-03 06:03External genomes: submitting a job with only and annotation and no FASTA should be disallowed
- Issue comment#285pansapiens2024-11-10 07:55Present appropriate nf-core/rnaseq Salmon counts for Degust (edgeR/limma), depending on detected experiment
- Issue#285pansapiens2024-11-10 07:55Present appropriate nf-core/rnaseq Salmon counts for Degust (edgeR/limma), depending on detected experiment
- Issue comment#287pansapiens2024-07-02 01:29Pipeline erroring out with segmentation error (139)
- Issue#287pansapiens2024-07-02 01:29Pipeline erroring out with segmentation error (139)
- Issue#287amdouek2024-03-18 05:25Pipeline erroring out with segmentation error (139)
- Issue comment#283pansapiens2024-02-26 05:55Detect and warn if samples files with I1 / I2 FASTQ files are included
- Issue comment#286pfh2024-02-07 07:27Distracting progress bar and layout popping on /#/job page
- Issue#286pansapiens2024-02-07 00:10Distracting progress bar and layout popping on /#/job page
- Issue#285pansapiens2024-01-30 01:45Present appropriate nf-core/rnaseq Salmon counts for Degust (edgeR/limma), depending on detected experiment
- Issue#284pansapiens2024-01-22 22:16is_paired.py pair-end filename detection script failing
- Issue#283pansapiens2024-01-18 23:14Detect and warn if samples files with I1 / I2 FASTQ files are included
- Issue#282pansapiens2023-12-05 05:26Allow nf-core/rnaseq UI to handle technical replicates
- Issue comment#30pansapiens2023-09-09 00:25Validate ENA / SRA IDs in search, support GSE* and GSM* IDs
- Issue comment#49pansapiens2023-09-09 00:21Streamlined submission to GEO
- Issue#49pansapiens2023-09-09 00:21Streamlined submission to GEO
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.