iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importing and exporting models specified using the Systems Biology Markup Language (SBML). iBioSim also supports the Synthetic Biology Open Language (SBOL), an emerging standard for information exchange in synthetic biology.
active 2023-10-21 → 2026-04-07 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 900 days from 2023-10-21 to 2026-04-07. Pushes: 1 total, peak 1 in a day. Pull requests: 4 total, peak 3 in a day. Issues: 11 total, peak 1 in a day. Comments: 26 total, peak 3 in a day. Stars: 14 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| cjmyers | 18 | 1 | 0 | 16 |
| PhysicsTeacher13 | 5 | 0 | 0 | 3 |
| dependabot[bot] | 4 | 0 | 4 | 0 |
| Hatem-synbio | 4 | 0 | 0 | 3 |
| sungjun-kim-1996 | 3 | 0 | 0 | 2 |
| zane-perry | 3 | 0 | 0 | 0 |
| travisformayor | 2 | 0 | 0 | 1 |
| pada8716 | 1 | 0 | 0 | 0 |
| kavi0zz | 1 | 0 | 0 | 0 |
| M3G4MAAN | 1 | 0 | 0 | 1 |
| evilspirit1611 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#644dependabot[bot]2025-12-23 17:01
- Pull request#644dependabot[bot]2025-12-23 17:01
- Pull request#644dependabot[bot]2025-12-23 17:01
- Issue#642cjmyers2025-11-05 22:33can´t run ibiosim
- Issue comment#642cjmyers2025-11-05 22:33can´t run ibiosim
- Issue comment#642cjmyers2025-11-03 18:27can´t run ibiosim
- Issue comment#642M3G4MAAN2025-11-03 00:32can´t run ibiosim
- Issue comment#642cjmyers2025-11-02 23:57can´t run ibiosim
- Issue comment#642cjmyers2025-11-02 16:45can´t run ibiosim
- Pull request#641dependabot[bot]2025-09-16 15:08
- Issue comment#640cjmyers2025-08-25 22:14A Java exception has occurred
- Issue#640evilspirit16112025-08-24 21:44A Java exception has occurred
- Issue#639kavi0zz2025-05-31 06:26Can't upload SynBioHub design
- Issue comment#638cjmyers2025-05-22 15:09Unable to run iBioSim 3.2.0 in Mac
- Issue comment#637Hatem-synbio2025-01-25 23:04Unable to generate models automatically
- Issue comment#637cjmyers2025-01-25 22:49Unable to generate models automatically
- Issue comment#637Hatem-synbio2025-01-21 18:36Unable to generate models automatically
- Issue comment#637cjmyers2025-01-21 16:26Unable to generate models automatically
- Issue comment#637Hatem-synbio2025-01-20 21:20Unable to generate models automatically
- Issue comment#637cjmyers2025-01-20 20:55Unable to generate models automatically
- Issue#637Hatem-synbio2025-01-20 01:29Unable to generate models automatically
- Issue#636zane-perry2025-01-18 16:42Cannot run iBioSim on macOS Sequoia 15.2
- Issue comment#636cjmyers2025-01-17 22:29Cannot run iBioSim on macOS Sequoia 15.2
- Issue#633zane-perry2025-01-17 21:27Cannot open application on MacOS Sonoma
- Issue comment#635sungjun-kim-19962025-01-11 10:55I cannot open iBioSim on Windows 11
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 14 stars here means stars gained during the window, not the repo's star count.