Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics
active 2023-08-17 → 2026-04-18 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 976 days from 2023-08-17 to 2026-04-18. Pushes: 26 total, peak 5 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 161 total, peak 5 in a day. Comments: 281 total, peak 10 in a day. Stars: 46 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| fcyu | 198 | 23 | 0 | 120 |
| anesvi | 22 | 3 | 0 | 18 |
| chambm | 17 | 0 | 0 | 13 |
| Heisenburger2020 | 10 | 0 | 0 | 9 |
| tjlundgren | 10 | 0 | 0 | 8 |
| JannikSchneider12 | 9 | 0 | 0 | 4 |
| HagemeijerRug | 9 | 0 | 0 | 8 |
| dpolasky | 8 | 0 | 0 | 8 |
| ClaSofMag | 7 | 0 | 0 | 6 |
| HijaziHassan | 7 | 0 | 0 | 3 |
| peteythecat1 | 6 | 0 | 0 | 5 |
| yonghanyu | 6 | 0 | 0 | 4 |
| agusinac | 6 | 0 | 0 | 4 |
| jafarilab | 5 | 0 | 0 | 5 |
| xLinkKnight | 5 | 0 | 0 | 2 |
| tanjagosnjak | 5 | 0 | 0 | 4 |
| patrick-willems | 5 | 0 | 0 | 4 |
| rnirujogi | 4 | 0 | 0 | 2 |
| maxochondria | 4 | 0 | 0 | 2 |
| vvsbiocode | 4 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Issue#401fcyu2026-04-18 17:48About resume from a breakpoint.
- Issue comment#404vvsbiocode2026-04-18 16:43DMO, pepXML, and modification localization
- Issue comment#404fcyu2026-04-18 16:17DMO, pepXML, and modification localization
- Issue#383fcyu2026-03-08 12:59Individual protein modification analysis by MSFragger
- Issue comment#399fcyu2026-01-05 14:37mzML files don't mention absorption spectra
- Issue#396fcyu2025-12-16 14:03Process 'MSFragger' finished, exit code: 1 Process returned non-zero exit code, stopping
- Issue comment#396fcyu2025-12-16 14:02Process 'MSFragger' finished, exit code: 1 Process returned non-zero exit code, stopping
- Issue#397fcyu2025-12-16 14:01Process 'MSFragger' finished, exit code: 1 Process returned non-zero exit code, stopping
- Issue#397Wenyi-iii2025-12-16 09:38Process 'MSFragger' finished, exit code: 1 Process returned non-zero exit code, stopping
- Issue#396lillian1357997531-cyber2025-12-16 09:26Process 'MSFragger' finished, exit code: 1 Process returned non-zero exit code, stopping
- Issue#392fcyu2025-11-02 14:39Precursor Mass Tolerance Discrepancy in Identification Results
- Issue#392lfu462025-11-02 14:33Precursor Mass Tolerance Discrepancy in Identification Results
- Issue comment#390wumingxiaocuier2025-10-24 09:41How to use open mode in Fragpipe？
- Issue comment#44kichem2043-beep2025-10-23 20:16Single amino acid polymorphisms
- Issue comment#390anesvi2025-10-23 10:53How to use open mode in Fragpipe？
- Issue comment#360SR-462025-10-16 03:45Not enough memory allocated to MSFragger
- Issue comment#360fcyu2025-10-16 03:33Not enough memory allocated to MSFragger
- Issue comment#360fcyu2025-10-15 23:44Not enough memory allocated to MSFragger
- Issue comment#360SR-462025-10-15 23:04Not enough memory allocated to MSFragger
- Issue comment#388fcyu2025-10-14 22:34FASTA database: 6 × 9-mer peptides — usable with MSFragger?
- Issue comment#385fcyu2025-10-07 17:44Error: Database file not found when using custom FASTA on Linux
- Issue#385JosieHong2025-10-07 17:42Error: Database file not found when using custom FASTA on Linux
- Issue#374fcyu2025-10-01 20:11I am a new user try to help me, label free quantification
- Issue#380fcyu2025-10-01 20:10MGF
- Issue#381fcyu2025-10-01 20:10Analyzer filters in Fragpipe
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 46 stars here means stars gained during the window, not the repo's star count.