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Repeat-aware polishing genomes assembled using HiFi long reads

active 2023-08-182026-04-07 (UTC)

Complete coverage26,699 / 26,699 hourly files (100%) · 2 absent upstream2023-08-152026-08-31 (UTC)
Events
205
Pushes
19
Pull requests
15
Issues
40
Stars
60
Forks
8

Activity over time

Daily event counts in the loaded window

Line chart, 964 days from 2023-08-18 to 2026-04-07. Pushes: 19 total, peak 2 in a day. Pull requests: 15 total, peak 2 in a day. Issues: 40 total, peak 2 in a day. Comments: 60 total, peak 6 in a day. Stars: 60 total, peak 3 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

Recent activity

Latest issues, pull requests and releases

  • Issue comment#42moold2025-09-09 02:07
    Questions about using NextPolish2 with Dorado-corrected reads
  • Issue comment#42alexpmagalhaes2025-09-07 15:05
    Questions about using NextPolish2 with Dorado-corrected reads
  • Issue comment#42moold2025-09-05 06:54
    Questions about using NextPolish2 with Dorado-corrected reads
  • Issue comment#4113373955712025-07-23 01:26
    The ability to use hifi data
  • Issue comment#41moold2025-07-23 01:20
    The ability to use hifi data
  • Issue#41moold2025-07-23 01:20
    The ability to use hifi data
  • Issue comment#40moold2025-07-08 05:31
    关于二倍体单倍型基因组分型组装的咨询
  • Issue#40moold2025-07-08 05:31
    关于二倍体单倍型基因组分型组装的咨询
  • Issue#40jinhua20242025-04-26 17:55
    关于二倍体单倍型基因组分型组装的咨询
  • Issue comment#39moold2025-04-21 01:43
    HiFi reads coverage
  • Issue#39bioyoshoo2025-04-18 16:56
    HiFi reads coverage
  • Issue comment#38moold2025-03-17 01:04
    no short reads
  • Issue#38moold2025-03-17 01:04
    no short reads
  • Issue#38Rhia152025-03-15 15:02
    no short reads
  • Issue comment#27moold2025-03-14 01:30
    兼容amd cpu
  • Issue comment#27DexinBo2025-03-10 08:31
    兼容amd cpu
  • Issue comment#37moold2025-02-05 13:31
    Is NextPolish2 suitable for metagenomes?
  • Issue#37moold2025-02-05 13:31
    Is NextPolish2 suitable for metagenomes?
  • Issue#37ailtonpcf2025-02-05 12:18
    Is NextPolish2 suitable for metagenomes?
  • Issue#35moold2025-01-09 01:25
    Tuning Parameters for Plant Assembly
  • Issue comment#36xusheng-code2024-12-17 02:50
    Install nextpolish2 with conda
  • Issue comment#36xusheng-code2024-12-17 01:02
    Install nextpolish2 with conda
  • Issue comment#36moold2024-11-23 04:26
    Install nextpolish2 with conda
  • Issue#36moold2024-11-23 04:26
    Install nextpolish2 with conda
  • Issue#36guianrey2024-11-22 19:36
    Install nextpolish2 with conda

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 60 stars here means stars gained during the window, not the repo's star count.