Package to extract Unannotated Regions from prokaryotic genomes report coding and pseudogenised genes delimited by stop codons - Named StORFs (Stop - Open Reading Frames)
active 2023-08-21 → 2026-01-15 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 879 days from 2023-08-21 to 2026-01-15. Pushes: 22 total, peak 3 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 13 total, peak 2 in a day. Comments: 14 total, peak 3 in a day. Stars: 4 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| NickJD | 38 | 22 | 0 | 9 |
| elchaarn | 4 | 0 | 0 | 3 |
| thorcs1 | 4 | 0 | 0 | 2 |
| Dx-wmc | 1 | 0 | 0 | 0 |
| pthieringer | 1 | 0 | 0 | 0 |
| LucyDillon | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#5thorcs12026-01-15 14:52Error when analysing a sequence
- Issue comment#5thorcs12026-01-15 14:52Error when analysing a sequence
- Issue comment#5NickJD2026-01-15 12:11Error when analysing a sequence
- Issue comment#5thorcs12026-01-15 11:28Error when analysing a sequence
- Issue#5thorcs12026-01-15 09:48Error when analysing a sequence
- ReleaseNickJD2024-10-23 18:36v1.4.2: Cleaned up some error messages, removed ORForise as a dependancy, fixed -spos parameter and corrected GFF positional information in some situations.
- Issue comment#4NickJD2024-09-25 14:50StORF reporter fails on specific gffs but not others
- Issue#4NickJD2024-09-25 14:50StORF reporter fails on specific gffs but not others
- ReleaseNickJD2024-09-25 02:11v1.4.1: Minor bug fixes for 'empty' contig handling and StORF filtering
- Issue#4LucyDillon2024-09-24 16:18StORF reporter fails on specific gffs but not others
- ReleaseNickJD2024-09-22 17:34v1.4.0: StORFs now rejected for non-standard NTs & minor bug fixes and speedups
- ReleaseNickJD2024-02-08 17:59v1.3.3: Fixed Con-StORFs middle stop and more IO errors.
- ReleaseNickJD2024-02-07 01:55v1.3.2: Fixed an issue with the hashing of the StORF IDs.
- Issue comment#1NickJD2024-01-21 22:09Multi-Genome GFF Enhancements
- Issue#1NickJD2024-01-21 22:09Multi-Genome GFF Enhancements
- ReleaseNickJD2024-01-21 22:09v1.3.1: Fixed FASTA output and empty dir handling for Multiple_Out_Dirs
- Issue#1NickJD2024-01-16 00:20Multi-Genome GFF Enhancements
- Issue#2NickJD2024-01-16 00:19Diversity of input folder names
- Issue comment#1elchaarn2024-01-15 23:04Multi-Genome GFF Enhancements
- Issue comment#2elchaarn2024-01-15 23:00Diversity of input folder names
- Issue comment#1elchaarn2024-01-15 22:56Multi-Genome GFF Enhancements
- Issue#1NickJD2023-12-20 19:37Multi-Genome GFF Enhancements
- Issue comment#1NickJD2023-12-20 19:33Multi-Genome GFF Enhancements
- ReleaseNickJD2023-12-20 19:32v1.3.0: 'Multiple_Out_Dirs' option added
- Issue comment#2NickJD2023-12-19 07:12Diversity of input folder names
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 4 stars here means stars gained during the window, not the repo's star count.