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Estimation of false discovery proportion for mass spectrometry proteomics data using entrapment

active 2024-06-012026-06-26 (UTC)

Partial coverage16,575 / 20,944 hourly files (79%) · 2 absent upstream · 4,368 failed, retryable2024-03-222026-08-12 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
64
Pushes
9
Pull requests
0
Issues
6
Stars
8
Forks
2

Activity over time

Daily event counts in the loaded window

Line chart, 756 days from 2024-06-01 to 2026-06-26. Pushes: 9 total, peak 4 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 6 total, peak 2 in a day. Comments: 37 total, peak 7 in a day. Stars: 8 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
tobiasko220020
wenbostar14903
adrianmarman3003
Francis-B3003
hollenstein2001
XinpeiYi1001
mfrejno1001
chinmayaNK221001

Recent activity

Latest issues, pull requests and releases

  • Issue comment#12adrianmarman2026-05-10 19:58
    Problems to calculate FDP to the peptide level in a benchmarking study with different DL models in FragPipe.
  • Issue comment#12adrianmarman2026-05-10 19:16
    Problems to calculate FDP to the peptide level in a benchmarking study with different DL models in FragPipe.
  • Issue comment#12adrianmarman2026-05-10 18:56
    Problems to calculate FDP to the peptide level in a benchmarking study with different DL models in FragPipe.
  • Issue comment#12wenbostar2026-05-10 17:12
    Problems to calculate FDP to the peptide level in a benchmarking study with different DL models in FragPipe.
  • Issue#10wenbostar2026-01-24 23:55
    Error when using a peptide level entrapment database for peptide-level FDP estimation
  • Issue comment#4wenbostar2026-01-24 23:54
    Help needed for FDP calculation
  • Issue#3wenbostar2026-01-24 23:54
    No FDP values for a dataset of 400,000 precursors
  • Issue comment#7wenbostar2026-01-24 23:54
    how to handle pre-digested peptides in fasta
  • Issue comment#10TMin-relax2025-07-24 06:00
    Error when using a peptide level entrapment database for peptide-level FDP estimation
  • Issue comment#10TMin-relax2025-07-24 05:12
    Error when using a peptide level entrapment database for peptide-level FDP estimation
  • Issue#10TMin-relax2025-07-23 07:37
    Error when using a peptide level entrapment database for peptide-level FDP estimation
  • Issue comment#9XinpeiYi2025-07-22 00:19
    Error when using mannually prepare peptide-level entrapment input for peptide-level FDP estimation
  • Issue comment#9XinpeiYi2025-07-22 00:16
    Error when using mannually prepare peptide-level entrapment input for peptide-level FDP estimation
  • Issue comment#9XinpeiYi2025-07-21 23:55
    Error when using mannually prepare peptide-level entrapment input for peptide-level FDP estimation
  • Issue comment#6tobiasko2025-07-03 09:42
    FDP estimation from Dia-NN main report
  • Issue comment#6tobiasko2025-07-03 09:20
    FDP estimation from Dia-NN main report
  • Issue comment#6mfrejno2025-07-03 08:57
    FDP estimation from Dia-NN main report
  • Issue comment#6tobiasko2025-06-27 14:05
    FDP estimation from Dia-NN main report
  • Issue comment#6tobiasko2025-06-25 10:14
    FDP estimation from Dia-NN main report
  • Issue comment#6tobiasko2025-06-23 08:14
    FDP estimation from Dia-NN main report
  • Issue comment#6tobiasko2025-06-23 08:01
    FDP estimation from Dia-NN main report
  • Issue comment#6tobiasko2025-06-20 15:28
    FDP estimation from Dia-NN main report
  • Issue comment#6tobiasko2025-06-20 15:22
    FDP estimation from Dia-NN main report
  • Issue comment#6tobiasko2025-06-20 15:20
    FDP estimation from Dia-NN main report
  • Issue comment#6tobiasko2025-06-19 14:43
    FDP estimation from Dia-NN main report

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 8 stars here means stars gained during the window, not the repo's star count.