Transformer deep learning model for de novo sequencing of data-independent acquisition mass spectrometry data
Python · active 2024-06-03 → 2026-04-08 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 675 days from 2024-06-03 to 2026-04-08. Pushes: 58 total, peak 22 in a day. Pull requests: 3 total, peak 1 in a day. Issues: 14 total, peak 1 in a day. Comments: 25 total, peak 5 in a day. Stars: 22 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| justin-a-sanders | 69 | 57 | 0 | 11 |
| wsnoble | 6 | 0 | 0 | 3 |
| aukeheerdink | 4 | 0 | 0 | 2 |
| Lilferrit | 3 | 1 | 2 | 0 |
| Jordano700 | 3 | 0 | 0 | 1 |
| JosefineTM | 2 | 0 | 0 | 2 |
| TaraBartolec | 2 | 0 | 0 | 1 |
| bsphinney | 2 | 0 | 0 | 1 |
| wuwo007 | 1 | 0 | 0 | 0 |
| lutfia95 | 1 | 0 | 0 | 1 |
| mriffle | 1 | 0 | 0 | 0 |
| grandrea | 1 | 0 | 0 | 0 |
| hddesai | 1 | 0 | 0 | 1 |
| MustafaElshani | 1 | 0 | 0 | 1 |
| AaronStorey | 1 | 0 | 0 | 1 |
| TheBobBob | 1 | 0 | 1 | 0 |
| michaeldammann | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#14Lilferrit2026-03-03 07:49
- Issue comment#12hddesai2026-01-27 15:17issue fetching unimod_tables.xml
- Issue comment#13justin-a-sanders2026-01-27 00:30Potential bug in _reindex
- Issue comment#12justin-a-sanders2026-01-27 00:29issue fetching unimod_tables.xml
- Issue comment#16wsnoble2026-01-12 02:50Seeking for asf format training set or a convert tool/script.
- Issue#16wsnoble2026-01-12 02:47Seeking for asf format training set or a convert tool/script.
- Issue comment#16wsnoble2026-01-12 02:33Seeking for asf format training set or a convert tool/script.
- Issue#16wsnoble2026-01-11 18:06Seeking for asf format training set or a convert tool/script.
- Issue comment#16wsnoble2026-01-11 18:06Seeking for asf format training set or a convert tool/script.
- Issue#15grandrea2025-12-29 12:29demo dataset crashes on gpu in cluster environment
- Pull request#14Lilferrit2025-10-31 21:03
- Issue#13wsnoble2025-10-31 18:42Potential bug in _reindex
- Pull request#9TheBobBob2025-09-17 20:19
- Issue comment#8bsphinney2025-08-11 17:28Running on google colab
- Issue#8bsphinney2025-08-07 19:22Running on google colab
- Issue comment#6lutfia952025-06-04 08:35http://www.unimod.org/xml/unimod_tables.xml empty or not found
- Issue comment#6MustafaElshani2025-04-28 09:44http://www.unimod.org/xml/unimod_tables.xml empty or not found
- Issue comment#5JosefineTM2025-03-13 17:04Demo file fails at prediction step
- Issue comment#5justin-a-sanders2025-03-13 16:47Demo file fails at prediction step
- Issue comment#5JosefineTM2025-03-13 15:31Demo file fails at prediction step
- Issue#7wuwo0072025-02-25 06:55The definition of write_results
- Issue#6mriffle2025-02-21 18:13http://www.unimod.org/xml/unimod_tables.xml empty or not found
- Issue comment#5TaraBartolec2025-02-14 10:51Demo file fails at prediction step
- Issue comment#5justin-a-sanders2025-02-13 22:52Demo file fails at prediction step
- Issue#5TaraBartolec2025-02-13 17:17Demo file fails at prediction step
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 22 stars here means stars gained during the window, not the repo's star count.