An awesome BCL demultiplexing and FastQ quality-control pipeline
active 2023-11-21 → 2025-04-22 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 519 days from 2023-11-21 to 2025-04-22. Pushes: 108 total, peak 12 in a day. Pull requests: 16 total, peak 3 in a day. Issues: 11 total, peak 5 in a day. Comments: 19 total, peak 3 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| rroutsong | 129 | 95 | 10 | 10 |
| skchronicles | 41 | 9 | 6 | 6 |
| ewalt98 | 5 | 0 | 0 | 3 |
| github-actions[bot] | 4 | 4 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#41rroutsong2025-04-15 14:00feat: update bigsky module initialization
- Issue comment#41ewalt982025-04-14 19:11feat: update bigsky module initialization
- Issue comment#38rroutsong2025-04-14 18:34Update pathing for bigsky
- Issue comment#41rroutsong2025-04-14 18:32feat: update bigsky module initialization
- Pull request#41rroutsong2025-04-10 21:29
- Issue comment#38ewalt982025-04-10 20:29Update pathing for bigsky
- Issue comment#38ewalt982025-04-10 20:22Update pathing for bigsky
- Issue comment#38rroutsong2025-03-10 15:10Update pathing for bigsky
- Issue comment#38rroutsong2025-03-10 15:00Update pathing for bigsky
- Pull request#39rroutsong2025-03-10 14:59
- Issue comment#39rroutsong2025-03-10 14:58Update bigsky.json
- Pull request#37rroutsong2024-02-28 18:22
- Pull request#37rroutsong2024-02-28 18:22
- Pull request#36skchronicles2024-02-08 21:01
- Issue comment#36rroutsong2024-02-08 20:59Skyline transfer
- Pull request#36rroutsong2024-02-07 22:51
- Issue#25rroutsong2024-02-01 01:55Add option to run disambiguate or separate reads from two organisms (i.e. host vs. virus or host vs. parasite)
- Issue#22rroutsong2024-02-01 01:54Kaiju: create Genus, Family, Order, Class output files
- Releaserroutsong2024-01-31 20:19Bigsky & Biowulf release
- Pull request#35skchronicles2024-01-16 17:48
- Pull request#35skchronicles2024-01-16 17:47
- Pull request#33skchronicles2024-01-16 17:32
- Issue#34skchronicles2024-01-12 17:32Downloading disambiguate reference files and alternative solutions
- Pull request#33rroutsong2024-01-11 17:07
- Issue#32rroutsong2024-01-10 19:58Alternative KRAKEN/KAIJU databases from command line
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.