Haplotype-based inference of recent effective population size in modern and ancient DNA samples
active 2023-12-01 → 2025-04-08 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 495 days from 2023-12-01 to 2025-04-08. Pushes: 8 total, peak 2 in a day. Pull requests: 2 total, peak 2 in a day. Issues: 8 total, peak 1 in a day. Comments: 22 total, peak 5 in a day. Stars: 8 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| rmnfournier | 21 | 8 | 2 | 11 |
| jaisonjseq | 4 | 0 | 0 | 3 |
| plubbe | 3 | 0 | 0 | 2 |
| mufernando | 3 | 0 | 0 | 2 |
| GrazieT | 2 | 0 | 0 | 1 |
| twooldridge | 2 | 0 | 0 | 1 |
| currocam | 1 | 0 | 0 | 1 |
| vicbp1 | 1 | 0 | 0 | 1 |
| sam-sacco | 1 | 0 | 0 | 0 |
| xiaolingLIANG | 1 | 0 | 0 | 0 |
| Schvartsman | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#3rmnfournier2025-04-04 20:29non-human genomes?
- Issue comment#9rmnfournier2025-04-04 20:26Format '.keep' in analisys of ancient samples
- Issue#9Schvartsman2025-04-02 09:23Format '.keep' in analisys of ancient samples
- Issue comment#3currocam2025-03-27 14:00non-human genomes?
- Issue comment#8twooldridge2025-02-06 21:32Flat history after adapting HapNe-LD to a non-model species with very low LD
- Issue comment#8mufernando2025-02-06 21:24Flat history after adapting HapNe-LD to a non-model species with very low LD
- Issue#8twooldridge2025-02-04 21:08Flat history after adapting HapNe-LD to a non-model species with very low LD
- Issue comment#3rmnfournier2025-01-31 14:48non-human genomes?
- Issue comment#3mufernando2025-01-30 21:20non-human genomes?
- Issue comment#7rmnfournier2024-09-24 17:31Using HapNe_IBD on ancestry filtered IBD segments
- Issue comment#6rmnfournier2024-09-24 17:25Consultation on the Scope of HapNe Application, Is It Applicable for Data Analysis of Non-human Primates?
- Issue#7sam-sacco2024-09-24 16:16Using HapNe_IBD on ancestry filtered IBD segments
- Issue#6xiaolingLIANG2024-09-16 04:15Consultation on the Scope of HapNe Application, Is It Applicable for Data Analysis of Non-human Primates?
- Issue comment#4rmnfournier2024-08-07 15:57vcf2fastsmc_in_parallel() takes 2 positional arguments but 5 were given
- Pull request#5rmnfournier2024-08-07 15:56
- Pull request#5rmnfournier2024-08-07 15:56
- Issue comment#4rmnfournier2024-07-26 21:53vcf2fastsmc_in_parallel() takes 2 positional arguments but 5 were given
- Issue comment#4vicbp12024-07-26 21:36vcf2fastsmc_in_parallel() takes 2 positional arguments but 5 were given
- Issue comment#4plubbe2024-06-12 03:46vcf2fastsmc_in_parallel() takes 2 positional arguments but 5 were given
- Issue comment#4plubbe2024-06-12 02:12vcf2fastsmc_in_parallel() takes 2 positional arguments but 5 were given
- Issue#4plubbe2024-06-10 02:14vcf2fastsmc_in_parallel() takes 2 positional arguments but 5 were given
- Issue comment#3rmnfournier2024-06-05 05:46non-human genomes?
- Issue#3mufernando2024-06-04 20:41non-human genomes?
- Issue comment#2GrazieT2024-05-31 07:57Problem with genetic map
- Issue comment#2rmnfournier2024-05-31 07:08Problem with genetic map
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 8 stars here means stars gained during the window, not the repo's star count.