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Pan-transcriptomic phenotyping

active 2024-06-052026-05-12 (UTC)

Partial coverage20,528 / 26,284 hourly files (78%) · 2 absent upstream · 5,753 failed, retryable2023-08-152026-08-14 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
65
Pushes
27
Pull requests
4
Issues
11
Stars
5
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 707 days from 2024-06-05 to 2026-05-12. Pushes: 27 total, peak 3 in a day. Pull requests: 4 total, peak 2 in a day. Issues: 11 total, peak 3 in a day. Comments: 2 total, peak 1 in a day. Stars: 5 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
daniel-munro432741
kkupkova1001

Recent activity

Latest issues, pull requests and releases

  • Releasedaniel-munro2026-03-08 19:36
    v1.3.1
  • Pull request#18daniel-munro2026-03-03 03:16
  • Releasedaniel-munro2025-08-31 00:51
    v1.2.0
  • Issue#16daniel-munro2025-08-31 00:44
    Allow non-Ensembl annotations to be used
  • Pull request#17daniel-munro2025-08-31 00:44
  • Pull request#17daniel-munro2025-08-31 00:42
  • Issue#16daniel-munro2025-07-13 02:06
    Allow non-Ensembl annotations to be used
  • Releasedaniel-munro2025-07-13 01:51
    v1.1.1
  • Releasedaniel-munro2025-06-09 22:46
    v1.1.0
  • Issue#14daniel-munro2025-06-09 22:44
    Add RNA editing modality
  • Pull request#15daniel-munro2025-06-09 22:42
  • Issue comment#12daniel-munro2025-05-04 02:08
    txrevise issue
  • Issue comment#12kkupkova2025-04-12 22:35
    txrevise issue
  • Releasedaniel-munro2025-03-02 21:02
    v1.0.4
  • Issue#10daniel-munro2025-03-01 21:25
    Add optional sample to individual mapping script
  • Issue#10daniel-munro2025-03-01 02:29
    Add optional sample to individual mapping script
  • Issue#8daniel-munro2025-02-07 23:23
    Empty TWAS weights when plink2R not installed
  • Issue#9daniel-munro2025-01-25 01:29
    Determine single-end/paired-end automatically on a per-sample basis
  • Issue#9daniel-munro2025-01-24 21:57
    Determine single-end/paired-end automatically on a per-sample basis
  • Releasedaniel-munro2025-01-14 04:15
    v1.0.3
  • Issue#7daniel-munro2025-01-14 04:09
    Update snakemake dependency to >=8
  • Issue#8daniel-munro2025-01-14 03:52
    Empty TWAS weights when plink2R not installed
  • Issue#6daniel-munro2025-01-14 02:18
    Do not delete pre-shrunken BAM files by default
  • Releasedaniel-munro2024-09-05 21:05
    v1.0.2

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.