ddna pharmcat
active 2023-08-15 → 2026-07-19 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1070 days from 2023-08-15 to 2026-07-19. Pushes: 363 total, peak 11 in a day. Pull requests: 10 total, peak 2 in a day. Issues: 110 total, peak 6 in a day. Comments: 259 total, peak 19 in a day. Stars: 54 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| markwoon | 324 | 198 | 4 | 84 |
| whaleyr | 157 | 82 | 1 | 59 |
| BinglanLi | 115 | 80 | 0 | 24 |
| kuanyili | 17 | 0 | 4 | 10 |
| katrinsangkuhl | 14 | 3 | 0 | 7 |
| hudja | 12 | 0 | 0 | 9 |
| Bioinf-usr | 11 | 0 | 0 | 7 |
| krukanna | 10 | 0 | 0 | 7 |
| lacek | 8 | 0 | 0 | 4 |
| moe1619 | 7 | 0 | 0 | 7 |
| anh151 | 7 | 0 | 0 | 3 |
| Bioinformatics295 | 5 | 0 | 0 | 5 |
| cariaso | 4 | 0 | 0 | 3 |
| Estefany2081 | 4 | 0 | 0 | 3 |
| mwcarrillo | 3 | 0 | 0 | 3 |
| pgonzale60 | 3 | 0 | 0 | 1 |
| diegomd90 | 3 | 0 | 0 | 1 |
| inti4digbi | 3 | 0 | 0 | 2 |
| AndreRico | 3 | 0 | 0 | 3 |
| songx | 3 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#233ranijames2026-05-11 19:52DPYD phenotype output discrepancy and genotype normalization behavior in PharmCAT 3.0.1
- Issue comment#222markwoon2026-02-17 22:26Preprocessing Failure: KeyError during VCF Normalization
- Issue comment#223markwoon2026-02-15 02:42VCF Issue while running PharmCAT pipeline
- Issue comment#223markwoon2026-02-14 19:08VCF Issue while running PharmCAT pipeline
- Issue comment#223Sillar-codes2026-02-14 05:27VCF Issue while running PharmCAT pipeline
- Issue comment#224markwoon2026-02-13 17:24Sequencing.com VCF files
- Issue comment#223markwoon2026-02-09 20:54VCF Issue while running PharmCAT pipeline
- Issue#223Sillar-codes2026-02-08 00:04VCF Issue while running PharmCAT pipeline
- Issue comment#220hudja2026-01-17 15:18exemptions.json does not work in the recent versions
- Issue comment#218markwoon2026-01-17 03:35Preprocessor forces REF/REF calls into multiallelic sites
- Issue#204markwoon2026-01-17 03:19Feature request: PharmCAT accepts no-call result from outside call file
- Issue comment#220markwoon2026-01-17 03:18exemptions.json does not work in the recent versions
- Issue comment#46markwoon2026-01-16 20:40Issue with rs746071566 variant representation formats in the source database
- Issue comment#220markwoon2026-01-16 02:34exemptions.json does not work in the recent versions
- Issue comment#218markwoon2026-01-16 02:31Preprocessor forces REF/REF calls into multiallelic sites
- Issue comment#46masger2026-01-15 15:56Issue with rs746071566 variant representation formats in the source database
- Issue comment#218markwoon2026-01-13 01:11Preprocessor forces REF/REF calls into multiallelic sites
- Issue comment#218hudja2026-01-12 23:56Preprocessor forces REF/REF calls into multiallelic sites
- Issue comment#218markwoon2026-01-09 16:52Preprocessor forces REF/REF calls into multiallelic sites
- Issue comment#215whaleyr2025-12-01 21:27Add Quickstart guide for new users
- Issue comment#204markwoon2025-11-12 16:29Feature request: PharmCAT accepts no-call result from outside call file
- Issue#167markwoon2025-11-12 02:08PharmCAT Annotation Error -- Triploid Genotypes
- Issue comment#167markwoon2025-11-12 02:08PharmCAT Annotation Error -- Triploid Genotypes
- Issue#211markwoon2025-11-11 19:42Crash on specific variants: `Not initialized - call generateSamplePermutations()`
- Issue#213markwoon2025-11-11 19:41Drug summary table based on recommendation labels
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 54 stars here means stars gained during the window, not the repo's star count.