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Deep learning framework for SV calling and genotyping

active 2023-08-182026-01-20 (UTC)

Partial coverage20,521 / 26,277 hourly files (78%) · 2 absent upstream · 5,753 failed, retryable2023-08-152026-08-13 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
41
Pushes
0
Pull requests
0
Issues
6
Stars
30
Forks
2

Activity over time

Daily event counts in the loaded window

Line chart, 887 days from 2023-08-18 to 2026-01-20. Pushes: 0 total, peak 0 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 6 total, peak 1 in a day. Comments: 3 total, peak 1 in a day. Stars: 30 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
ld98662000
kuro77662001
leon9459452001
jingydz1000
zhujiahua7004031001
YihangLin1231000

Recent activity

Latest issues, pull requests and releases

  • Issue#36YihangLin1232025-09-08 07:46
    Inquiry About Pre-trained Cue Models for Long-Read Sequencing (e.g., Fully Trained PacBio Model)
  • Issue comment#32zhujiahua7004032025-01-01 10:07
    Does cue apply to non-human species
  • Issue comment#30leon9459452024-03-23 08:34
    installation error
  • Issue#30leon9459452024-03-23 04:29
    installation error
  • Issue#24ld98662024-02-17 08:40
    How to translate the vcf result to the type same to the type such as manta and delly
  • Issue#26kuro77662023-12-24 01:41
    KeyError: 'None-HET'
  • Issue comment#16kuro77662023-11-04 01:58
    ModuleNotFoundError: No module named 'engine'
  • Issue#24ld98662023-08-30 02:29
    How to translate the vcf result to the type same to the type such as manta and delly
  • Issue#23jingydz2023-08-18 19:22
    the difference among cue-synth-datasets/benchmarks/basic/cue/linked, long and short?

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 30 stars here means stars gained during the window, not the repo's star count.