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QuackenbushLab/NetworkDataCompanion

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An R library of utilities for performing analyses on TCGA and GTEx data using the Network Zoo

active 2024-11-052025-12-05 (UTC)

Complete coverage26,415 / 26,415 hourly files (100%) · 2 absent upstream2023-08-152026-08-19 (UTC)
Events
119
Pushes
44
Pull requests
20
Issues
20
Stars
4
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 396 days from 2024-11-05 to 2025-12-05. Pushes: 44 total, peak 14 in a day. Pull requests: 20 total, peak 4 in a day. Issues: 20 total, peak 4 in a day. Comments: 11 total, peak 2 in a day. Stars: 4 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
katehoffshutta6926207
soelmicheletti201602
qxmdd2001
pmandros2001
violafanfani1100
github-actions[bot]1100

Recent activity

Latest issues, pull requests and releases

  • Releasekatehoffshutta2025-05-07 01:47
    Initial release
  • Issue comment#60katehoffshutta2025-05-07 01:42
    Add methods for combining duplicate samples
  • Issue#60katehoffshutta2025-05-07 01:42
    Add methods for combining duplicate samples
  • Issue comment#61katehoffshutta2025-05-07 01:37
    Create unified quickstart guide and improve docs
  • Issue#61katehoffshutta2025-05-07 01:37
    Create unified quickstart guide and improve docs
  • Pull request#76katehoffshutta2025-05-07 01:36
  • Pull request#76katehoffshutta2025-05-07 01:36
  • Pull request#75katehoffshutta2025-05-07 01:33
  • Pull request#75katehoffshutta2025-05-07 01:25
  • Pull request#74katehoffshutta2025-05-05 23:13
  • Pull request#74katehoffshutta2025-05-05 23:10
  • Pull request#73katehoffshutta2025-05-05 21:13
  • Pull request#73katehoffshutta2025-05-05 20:51
  • Pull request#72katehoffshutta2025-04-29 09:57
  • Pull request#72katehoffshutta2025-04-29 09:57
  • Issue comment#48katehoffshutta2025-04-24 19:18
    logCPM and logTPM are not coherent
  • Issue#70katehoffshutta2025-04-10 10:19
    TCGA+GTEx
  • Issue#70katehoffshutta2025-04-04 15:02
    TCGA+GTEx
  • Issue#70katehoffshutta2025-04-04 15:02
    TCGA+GTEx
  • Issue comment#70qxmdd2025-04-04 09:03
    TCGA+GTEx
  • Issue#71katehoffshutta2025-04-04 08:53
    Unit test needed - mapProbesToGenes with mapToNearest = T
  • Pull request#69katehoffshutta2025-04-04 08:49
  • Issue comment#70katehoffshutta2025-04-04 08:47
    TCGA+GTEx
  • Issue#70qxmdd2025-04-04 07:16
    TCGA+GTEx
  • Pull request#69katehoffshutta2025-04-02 21:32

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 4 stars here means stars gained during the window, not the repo's star count.