Tools and methods for analysis of single cell assay data in R
active 2023-09-06 → 2026-01-21 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 869 days from 2023-09-06 to 2026-01-21. Pushes: 2 total, peak 1 in a day. Pull requests: 4 total, peak 3 in a day. Issues: 19 total, peak 2 in a day. Comments: 22 total, peak 7 in a day. Stars: 63 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| amcdavid | 15 | 2 | 3 | 9 |
| derrik-gratz | 7 | 0 | 1 | 3 |
| nfancy | 6 | 0 | 0 | 5 |
| JThomasWatson | 4 | 0 | 0 | 1 |
| mspivakov | 4 | 0 | 0 | 2 |
| nhu-github | 2 | 0 | 0 | 0 |
| gfinak | 1 | 0 | 0 | 1 |
| rheupion | 1 | 0 | 0 | 0 |
| Mark-wt | 1 | 0 | 0 | 0 |
| fnhe | 1 | 0 | 0 | 0 |
| rootze | 1 | 0 | 0 | 1 |
| ZunpengLiu | 1 | 0 | 0 | 0 |
| andrewsong777 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#195juanmoriano2025-07-24 22:07‘lmer’ method in Zlm function obviates first factor level
- Issue#194jsha1292025-07-23 23:42Unable to install MAST on Mac Bioconductor v3.22
- Issue#193Mark-wt2025-07-07 06:13Does the output coef mean lnFC or log2FC?
- Issue comment#192amcdavid2025-05-09 17:50When I try to install "MAST", the error occurred as follows and installation halted.
- Issue#192rheupion2025-05-06 05:25When I try to install "MAST", the error occurred as follows and installation halted.
- Issue comment#187rootze2024-11-27 18:32Error: grouping factors must have > 1 sampled level
- Issue comment#191amcdavid2024-10-28 22:50Residual hook causes NAs
- Issue comment#191JThomasWatson2024-10-28 14:04Residual hook causes NAs
- Issue#191JThomasWatson2024-10-14 15:29Residual hook causes NAs
- Issue#190JThomasWatson2024-10-07 15:34Clarification on input data
- Issue#190JThomasWatson2024-10-03 21:21Clarification on input data
- Issue#189nhu-github2024-05-23 03:22Can NOT install MAST
- Issue#189nhu-github2024-05-23 03:07Can NOT install MAST
- Issue#188ZunpengLiu2024-05-08 16:44DEG counts are associated with the number of cells
- Issue#187andrewsong7772024-03-04 19:19Error: grouping factors must have > 1 sampled level
- Issue comment#184nfancy2024-02-15 07:32Error in getClassDef(x@superClass, package = packageSlot(x))@virtual : no applicable method for `@` applied to an object of class "NULL"
- Issue comment#184amcdavid2024-02-14 21:13Error in getClassDef(x@superClass, package = packageSlot(x))@virtual : no applicable method for `@` applied to an object of class "NULL"
- Issue comment#184nfancy2024-02-14 20:18Error in getClassDef(x@superClass, package = packageSlot(x))@virtual : no applicable method for `@` applied to an object of class "NULL"
- Issue comment#184amcdavid2024-02-14 19:02Error in getClassDef(x@superClass, package = packageSlot(x))@virtual : no applicable method for `@` applied to an object of class "NULL"
- Issue comment#184nfancy2024-02-14 11:33Error in getClassDef(x@superClass, package = packageSlot(x))@virtual : no applicable method for `@` applied to an object of class "NULL"
- Issue comment#184amcdavid2024-02-14 00:45Error in getClassDef(x@superClass, package = packageSlot(x))@virtual : no applicable method for `@` applied to an object of class "NULL"
- Issue comment#186amcdavid2024-02-14 00:31Got error when using summary(zlmCond.glmer)
- Issue#186amcdavid2024-02-14 00:31Got error when using summary(zlmCond.glmer)
- Issue comment#184nfancy2024-02-14 00:00Error in getClassDef(x@superClass, package = packageSlot(x))@virtual : no applicable method for `@` applied to an object of class "NULL"
- Issue comment#184nfancy2024-02-13 23:49Error in getClassDef(x@superClass, package = packageSlot(x))@virtual : no applicable method for `@` applied to an object of class "NULL"
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 63 stars here means stars gained during the window, not the repo's star count.