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RIVM-bioinformatics/SARS2seq

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SARS2seq is a pipeline designed to process raw FastQ data from targeted SARS-CoV-2 sequencing and generate biologically correct consensus sequences of the SARS-CoV-2 genome.

active 2023-08-212024-07-03 (UTC)

Complete coverage27,126 / 27,128 hourly files (100%) · 2 absent upstream2023-08-152026-09-18 (UTC)
Events
27
Pushes
11
Pull requests
5
Issues
0
Stars
2
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 318 days from 2023-08-21 to 2024-07-03. Pushes: 11 total, peak 6 in a day. Pull requests: 5 total, peak 4 in a day. Issues: 0 total, peak 0 in a day. Comments: 2 total, peak 1 in a day. Stars: 2 total, peak 2 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
florianzwagemaker12750
ids-bioinformatics4202
github-actions[bot]2200

Recent activity

Latest issues, pull requests and releases

  • Issue comment#72ids-bioinformatics2024-07-03 13:12
  • Pull request#72florianzwagemaker2024-07-03 13:12
  • Pull request#71florianzwagemaker2024-04-04 12:38
  • Issue comment#70ids-bioinformatics2024-04-04 12:20
  • Releasev0.6.7ids-bioinformatics2024-04-04 12:20
  • Pull request#70florianzwagemaker2024-04-04 12:20
  • Pull request#69florianzwagemaker2024-04-04 12:18
  • Pull request#69florianzwagemaker2024-04-04 12:16

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.