Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
active 2023-08-15 → 2026-07-22 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1073 days from 2023-08-15 to 2026-07-22. Pushes: 1,338 total, peak 42 in a day. Pull requests: 291 total, peak 10 in a day. Issues: 808 total, peak 32 in a day. Comments: 2,429 total, peak 70 in a day. Stars: 9 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| saramsey | 1.6K | 295 | 99 | 965 |
| edeutsch | 883 | 175 | 33 | 438 |
| amykglen | 467 | 199 | 2 | 214 |
| sundareswarpullela | 370 | 222 | 15 | 90 |
| mohsenht | 336 | 136 | 41 | 58 |
| dkoslicki | 320 | 24 | 13 | 193 |
| chunyuma | 261 | 62 | 9 | 141 |
| isbluis | 171 | 52 | 0 | 98 |
| kvnthomas98 | 165 | 62 | 16 | 60 |
| bazarkua | 142 | 58 | 7 | 55 |
| hodgesf | 51 | 36 | 0 | 9 |
| dependabot[bot] | 45 | 6 | 34 | 5 |
| pahmadi8740 | 21 | 0 | 20 | 1 |
| ShannonRanio | 14 | 0 | 0 | 14 |
| maximusunc | 11 | 0 | 0 | 8 |
| Copilot | 11 | 0 | 0 | 10 |
| ecwood | 9 | 0 | 0 | 7 |
| venkataseshtej | 7 | 5 | 0 | 1 |
| sandrine-muller-research | 6 | 0 | 0 | 2 |
| mfl15 | 6 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#2778dkoslicki2026-07-08 19:34Include all of edges attributes of Translator KG in the KGX into the xDTD-inferred MOA edges
- Issue#2828hodgesf2026-07-01 03:59Failing tests in 20260621 rollout
- Issue#2812saramsey2026-06-16 23:59Tier 0 ARAX rollout: for June 25th deployment
- Issue#2782bazarkua2026-06-06 22:26Synonyms returning non-human genes
- Issue comment#2782bazarkua2026-06-06 22:26Synonyms returning non-human genes
- Pull request#2795bazarkua2026-06-03 21:36
- Issue#2794saramsey2026-05-29 17:30make ARAX_query.py and knowledge_graph_metadata.py eagerly import
- Issue comment#2788saramsey2026-05-28 19:22In ARAX, there is a race condition in the loading of `kp_info_cacher.py` when the Flask application starts up
- Issue comment#2785saramsey2026-05-28 00:01Tweak ARAX_database_manager.py so it can auto-generate symlinks in "-g" mode
- Issue comment#2785saramsey2026-05-27 23:44Tweak ARAX_database_manager.py so it can auto-generate symlinks in "-g" mode
- Issue comment#2782saramsey2026-05-27 04:27Synonyms returning non-human genes
- Issue comment#2782bazarkua2026-05-27 01:47Synonyms returning non-human genes
- Issue comment#2772venkataseshtej2026-05-26 21:32Integrate reusable xCRG package into ARAX
- Pull request#2783mohsenht2026-05-23 18:22
- Issue#2781dkoslicki2026-05-22 03:00xDTD uncaught error
- Issue comment#2772dkoslicki2026-05-20 17:39Integrate reusable xCRG package into ARAX
- Issue comment#2777dkoslicki2026-05-20 17:18Some edge attributes/metadata not getting displayed in ARAX UI
- Pull request#2776saramsey2026-05-18 23:50
- Issue comment#2772saramsey2026-05-18 23:48Integrate reusable xCRG package into ARAX
- Issue comment#2730bazarkua2026-05-15 01:01Attempt to stand up an ARAX using the Translator Tier0 graph and NodeNorm internally (instead of KG2)
- Issue comment#2730bazarkua2026-05-14 05:07Attempt to stand up an ARAX using the Translator Tier0 graph and NodeNorm internally (instead of KG2)
- Issue comment#2730edeutsch2026-05-14 03:12Attempt to stand up an ARAX using the Translator Tier0 graph and NodeNorm internally (instead of KG2)
- Issue comment#2730bazarkua2026-05-14 00:03Attempt to stand up an ARAX using the Translator Tier0 graph and NodeNorm internally (instead of KG2)
- Issue comment#2730edeutsch2026-05-13 23:34Attempt to stand up an ARAX using the Translator Tier0 graph and NodeNorm internally (instead of KG2)
- Issue comment#2730bazarkua2026-05-13 23:25Attempt to stand up an ARAX using the Translator Tier0 graph and NodeNorm internally (instead of KG2)
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 9 stars here means stars gained during the window, not the repo's star count.