Variational autoencoder for metagenomic binning
active 2023-08-19 → 2026-04-30 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 986 days from 2023-08-19 to 2026-04-30. Pushes: 483 total, peak 61 in a day. Pull requests: 205 total, peak 8 in a day. Issues: 151 total, peak 6 in a day. Comments: 259 total, peak 12 in a day. Stars: 95 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| jakobnissen | 629 | 233 | 182 | 144 |
| Paupiera | 154 | 149 | 2 | 3 |
| Las02 | 85 | 82 | 2 | 1 |
| sgalkina | 62 | 17 | 11 | 19 |
| B1991ing | 20 | 0 | 0 | 10 |
| guangingmai | 15 | 0 | 0 | 5 |
| shiraz-shah | 14 | 0 | 0 | 9 |
| ChaoXianSen | 11 | 0 | 0 | 4 |
| zzsunday | 8 | 0 | 0 | 7 |
| enryH | 7 | 2 | 1 | 3 |
| ml-sva | 6 | 0 | 0 | 3 |
| aistBMRG | 5 | 0 | 0 | 3 |
| kshitijtandon | 4 | 0 | 0 | 2 |
| adityabandla | 4 | 0 | 0 | 2 |
| StickHu | 4 | 0 | 0 | 1 |
| heavennew | 4 | 0 | 0 | 3 |
| dependabot[bot] | 4 | 0 | 3 | 1 |
| Prunoideae | 4 | 0 | 0 | 0 |
| MapleHe | 3 | 0 | 0 | 2 |
| michoug | 3 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#468jakobnissen2026-02-02 09:21
- Pull request#467jakobnissen2026-01-10 09:18
- Issue comment#464ntromas2025-11-27 12:01Missing taxa
- Issue comment#418szimmerman922025-11-24 17:59running error of create_fasta.py
- Pull request#463dependabot[bot]2025-11-13 08:25
- Pull request#463dependabot[bot]2025-11-13 08:25
- Issue comment#460xvazquezc2025-11-13 07:48binsplitting not happening with different separator?
- Issue comment#460jakobnissen2025-11-13 06:37binsplitting not happening with different separator?
- Issue#456jakobnissen2025-11-13 06:32Taxonomy is ambiguous: "g_XXX" has multiple parents
- Issue comment#456jakobnissen2025-11-13 06:32Taxonomy is ambiguous: "g_XXX" has multiple parents
- Issue#460xvazquezc2025-11-05 02:58binsplitting not happening with different separator?
- Issue comment#459beaPhD2025-11-04 03:02Different Bin Counts
- Issue comment#456jakobnissen2025-10-16 09:52Taxonomy is ambiguous: "g_XXX" has multiple parents
- Issue#456michoug2025-10-03 11:08Taxonomy is ambiguous: "g_XXX" has multiple parents
- Issue comment#446jakobnissen2025-09-29 11:01taxvamb with ncbi taxonomy and "_environmental samples"
- Issue#446jakobnissen2025-09-29 11:01taxvamb with ncbi taxonomy and "_environmental samples"
- Issue comment#446ailtonpcf2025-09-26 14:06taxvamb with ncbi taxonomy and "_environmental samples"
- Pull request#454jakobnissen2025-08-27 09:37
- Pull request#455jakobnissen2025-08-27 08:47
- Pull request#454sgalkina2025-08-26 13:41
- Issue#428sgalkina2025-08-11 06:43Output clusters during clustering
- Pull request#450sgalkina2025-08-11 06:43
- Pull request#452ElekLamoureux2025-07-06 21:24
- Pull request#451sgalkina2025-06-27 20:56
- Issue#361Prunoideae2025-06-27 09:29[Suggestion] Include a way to wash and sort lineage output from MMSeqs2
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 95 stars here means stars gained during the window, not the repo's star count.