Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data
active 2023-08-22 → 2026-02-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 910 days from 2023-08-22 to 2026-02-16. Pushes: 165 total, peak 24 in a day. Pull requests: 16 total, peak 6 in a day. Issues: 58 total, peak 6 in a day. Comments: 33 total, peak 4 in a day. Stars: 27 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| Tassadaar | 124 | 65 | 10 | 18 |
| dzhao2019 | 119 | 96 | 6 | 6 |
| DEsalasL | 4 | 4 | 0 | 0 |
| alexprp | 4 | 0 | 0 | 2 |
| DizzySpore | 4 | 0 | 0 | 2 |
| mars188 | 3 | 0 | 0 | 2 |
| k6logc | 2 | 0 | 0 | 1 |
| H1889 | 2 | 0 | 0 | 1 |
| aleixop | 2 | 0 | 0 | 1 |
| joao1980 | 2 | 0 | 0 | 0 |
| PonderLi | 2 | 0 | 0 | 0 |
| durubing-jn | 1 | 0 | 0 | 0 |
| jonstrutz11 | 1 | 0 | 0 | 0 |
| ailtonpcf | 1 | 0 | 0 | 0 |
| CujoChenFuyoh | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#43mars1882026-02-16 10:04Is it mandatory to have unpaired reads?
- Issue comment#43mars1882026-02-12 10:36Is it mandatory to have unpaired reads?
- Issue#22dzhao20192026-01-16 05:39Database Building Instructions
- Issue#43dzhao20192026-01-16 05:38Is it mandatory to have unpaired reads?
- Issue#10dzhao20192026-01-14 18:40Eukfinder installation error: SyntaxWarning: invalid escape sequence '\s'
- Issue#43mars1882026-01-14 09:36Is it mandatory to have unpaired reads?
- Issue#42CujoChenFuyoh2025-11-27 15:53Missing file error in eukfinder download_db
- Issue comment#40k6logc2025-10-05 19:26database download page is down?
- Issue comment#40dzhao20192025-10-04 01:09database download page is down?
- Issue#40k6logc2025-10-01 01:39database download page is down?
- Issue comment#39dzhao20192025-09-23 18:29Too many (255) threads of LokyProcess
- Issue comment#38dzhao20192025-09-23 18:05Equivalent plast command to Diamond/Blast/Mmseqs2
- Issue comment#36dzhao20192025-09-23 17:55Failed to create a temporary folder
- Issue#39PonderLi2025-09-11 23:32Too many (255) threads of LokyProcess
- Issue#39PonderLi2025-09-11 02:15Too many (255) threads of LokyProcess
- Issue comment#37alexprp2025-08-28 16:01Multiple cryptic error messages when running on fasta file on server
- Issue#37alexprp2025-08-28 16:01Multiple cryptic error messages when running on fasta file on server
- Issue#37alexprp2025-08-28 14:34Multiple cryptic error messages when running on fasta file on server
- Issue comment#36alexprp2025-08-28 13:43Failed to create a temporary folder
- Issue#35durubing-jn2025-08-04 02:30adaptor_file_location
- Issue#34joao19802025-07-17 05:47Out of memory
- Issue#33joao19802025-07-17 05:46PLAST database does not exist
- Issue#20Tassadaar2025-04-25 14:59eukfinder v1.2.4
- Issue comment#32DizzySpore2025-04-25 11:41Conda installation
- Issue#32DizzySpore2025-04-25 11:41Conda installation
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 27 stars here means stars gained during the window, not the repo's star count.