Central repository for biomolecular foundation models with shared trainers and pipeline components
active 2025-08-15 → 2025-12-02 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 110 days from 2025-08-15 to 2025-12-02. Pushes: 10 total, peak 2 in a day. Pull requests: 5 total, peak 2 in a day. Issues: 11 total, peak 2 in a day. Comments: 23 total, peak 5 in a day. Stars: 105 total, peak 18 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| nscorley | 20 | 8 | 3 | 7 |
| Croydon-Brixton | 9 | 1 | 0 | 7 |
| roccomoretti | 4 | 0 | 1 | 2 |
| tsamdin | 3 | 0 | 0 | 1 |
| prwoolley | 2 | 0 | 0 | 1 |
| ShuhaoGithub | 2 | 0 | 0 | 1 |
| kierandidi | 2 | 1 | 1 | 0 |
| JoshuaMeyers | 2 | 0 | 0 | 0 |
| fredricj | 1 | 0 | 0 | 0 |
| 04en19 | 1 | 0 | 0 | 1 |
| ulupo | 1 | 0 | 0 | 1 |
| alexhilditch | 1 | 0 | 0 | 0 |
| onestardao | 1 | 0 | 0 | 1 |
| biochristmas | 1 | 0 | 0 | 1 |
| mzc2113391 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#27fredricj2025-12-02 07:54Instructions for generating MSA
- Issue comment#26ShuhaoGithub2025-11-14 08:32how to use template
- Issue#26ShuhaoGithub2025-11-03 20:22how to use template
- Issue#23tsamdin2025-10-21 14:52InstantiationException: Error in call to target when using sequence with D-amino acid
- Issue comment#18tsamdin2025-10-07 19:45Using Modelforge -RF3 to test protein folding of sequences containing D-residues in main chain.
- Issue comment#18roccomoretti2025-10-07 19:22Using Modelforge -RF3 to test protein folding of sequences containing D-residues in main chain.
- Issue#18tsamdin2025-10-07 18:38Using Modelforge -RF3 to test protein folding of sequences containing D-residues in main chain.
- Issue comment#17roccomoretti2025-10-03 14:43Add example cases involving DNA and RNA for structure prediction
- Issue#17mzc21133912025-10-03 14:29Add example cases involving DNA and RNA for structure prediction
- Issue#15roccomoretti2025-09-30 23:36Error message for missing component files is sub-optimal
- Pull request#14roccomoretti2025-09-30 20:58
- Issue comment#13prwoolley2025-09-26 15:57Null character being parsed in a3m file
- Issue comment#13nscorley2025-09-26 04:56Null character being parsed in a3m file
- Issue#13prwoolley2025-09-24 18:04Null character being parsed in a3m file
- Issue comment#5Croydon-Brixton2025-09-20 15:23Issues running on `Titan RTX` (`A100` & `4090D` work)
- Issue comment#8biochristmas2025-09-20 09:01No matching distribution found for cuequivariance-ops-cu12>=0.5.0; sys_platform == "linux"
- Issue#4nscorley2025-09-19 23:21Could you provide an example of input with provided MSA?
- Pull request#11nscorley2025-09-19 23:18
- Issue comment#11ulupo2025-09-19 14:07Fix iptm bug, add min ipae and ipde calc and ruff formatting
- Pull request#11kierandidi2025-09-19 01:47
- Issue#10alexhilditch2025-09-18 06:30Input direct from PDB file fails
- Pull request#9nscorley2025-09-18 04:42
- Pull request#9nscorley2025-09-17 11:02
- Issue comment#7nscorley2025-09-12 21:07Refactor/update atomworks paths
- Issue comment#504en192025-08-30 02:27Request for Detailed Installation Instructions
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 105 stars here means stars gained during the window, not the repo's star count.