Rapidly extract reads from a FASTQ file based on taxonomic classification via Kraken2.
active 2025-03-15 → 2026-06-15 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 458 days from 2025-03-15 to 2026-06-15. Pushes: 23 total, peak 4 in a day. Pull requests: 4 total, peak 1 in a day. Issues: 5 total, peak 1 in a day. Comments: 1 total, peak 1 in a day. Stars: 3 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
Recent activity
Latest issues, pull requests and releases
- Issue#35Sam-Sims2025-12-12 14:41non-standard kraken reports with headers cant be parsed
- Issue#33Sam-Sims2025-10-16 13:56panic when output filename has no extension
- Pull request#34Sam-Sims2025-10-16 13:56
- Releasegithub-actions[bot]2025-09-26 14:00kractor-3.0.0
- Releasegithub-actions[bot]2025-09-26 13:54kractor-3.0.0
- Pull request#32Sam-Sims2025-09-26 13:52
- Issue comment#30Sam-Sims2025-09-26 13:510 not recognised as unclassified
- Issue#30JessF2982025-09-26 10:040 not recognised as unclassified
- Issue#8Sam-Sims2025-08-13 09:06Track read counts when running in paired end mode and warn user if read counts differ between R1 and R2
- Pull request#29Sam-Sims2025-08-12 17:59
- Releasegithub-actions[bot]2025-06-28 09:30kractor-1.0.1
- Pull request#26Sam-Sims2025-06-28 09:15
- Issue#24Sam-Sims2025-06-27 14:37Error if output subdirectory doesnt exist
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.