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SantosRAC/transcriptome_microbiome_integration

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Nextflow pipeline for microbiome-transcriptome integration

active 2025-04-302025-08-21 (UTC)

Complete coverage26,638 / 26,638 hourly files (100%) · 2 absent upstream2023-08-152026-08-28 (UTC)
Events
41
Pushes
10
Pull requests
11
Issues
5
Stars
1
Forks
3

Activity over time

Daily event counts in the loaded window

Line chart, 114 days from 2025-04-30 to 2025-08-21. Pushes: 10 total, peak 1 in a day. Pull requests: 11 total, peak 3 in a day. Issues: 5 total, peak 3 in a day. Comments: 2 total, peak 2 in a day. Stars: 1 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
SantosRAC10260
felipevzps9222
portillanath7610
jomare11881010

Recent activity

Latest issues, pull requests and releases

  • Pull request#13SantosRAC2025-08-21 19:57
  • Pull request#14SantosRAC2025-08-21 19:55
  • Pull request#14jomare11882025-08-21 16:59
  • Pull request#12felipevzps2025-08-08 23:34
  • Pull request#12felipevzps2025-08-08 23:33
  • Issue comment#4felipevzps2025-08-07 20:05
    Remove the fastspar module (or replace by SparXCC)
  • Issue#4felipevzps2025-08-07 20:05
    Remove the fastspar module (or replace by SparXCC)
  • Issue comment#3felipevzps2025-08-07 20:05
    Align good practices of Nextflow development
  • Issue#3felipevzps2025-08-07 20:05
    Align good practices of Nextflow development
  • Issue#2felipevzps2025-08-07 20:04
    Create SparXCC function and associated module
  • Pull request#10SantosRAC2025-08-07 20:02
  • Pull request#1SantosRAC2025-08-07 19:59
  • Pull request#8SantosRAC2025-08-07 19:58
  • Pull request#7SantosRAC2025-08-03 23:05
  • Pull request#7jomare11882025-07-24 20:13
  • Issue#4SantosRAC2025-07-17 19:21
    Remove the fastspar module (or replace by SparXCC)
  • Issue#2SantosRAC2025-07-17 19:14
    Create SparXCC function and associated module
  • Pull request#1portillanath2025-06-26 21:15

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.