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Pipeline meant to segment and classify organoids, or any other blob-like structures (star-convex polygons). Microscopy images can be easily annotated in QuPath and automatically processed afterwards to count the class distribution within each image using this pipeline (TIF files will be converted to grayscale)

active 2024-06-282025-01-17 (UTC)

Complete coverage26,766 / 26,766 hourly files (100%) · 2 absent upstream2023-08-152026-09-03 (UTC)
Events
13
Pushes
5
Pull requests
0
Issues
0
Stars
3
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 204 days from 2024-06-28 to 2025-01-17. Pushes: 5 total, peak 2 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 0 total, peak 0 in a day. Comments: 0 total, peak 0 in a day. Stars: 3 total, peak 2 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
Scaramir5500

Recent activity

Latest issues, pull requests and releases

  • ReleaseScaramir2024-07-01 15:09
    Development state
  • ReleaseScaramir2024-06-28 17:16
    Development state

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.