A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
active 2023-08-15 → 2026-08-13 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1095 days from 2023-08-15 to 2026-08-13. Pushes: 1,317 total, peak 12 in a day. Pull requests: 228 total, peak 10 in a day. Issues: 521 total, peak 16 in a day. Comments: 472 total, peak 17 in a day. Stars: 96 total, peak 7 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| ElpadoCan | 1.9K | 1.2K | 132 | 179 |
| Teranis | 306 | 114 | 70 | 36 |
| Copilot | 122 | 2 | 0 | 64 |
| github-actions[bot] | 107 | 3 | 0 | 90 |
| bots-schmollerlab | 27 | 0 | 0 | 0 |
| jacobmhkim | 20 | 0 | 0 | 13 |
| ptlzon | 15 | 0 | 0 | 8 |
| jordanyx | 15 | 0 | 0 | 10 |
| Beno71 | 14 | 3 | 0 | 3 |
| leon11345e | 10 | 0 | 0 | 6 |
| Dtzibell | 9 | 0 | 1 | 5 |
| Akankshazmaze | 8 | 0 | 0 | 7 |
| emilyjyang | 7 | 0 | 0 | 5 |
| martamg01 | 6 | 0 | 0 | 5 |
| ArohiKhurana | 5 | 0 | 0 | 2 |
| keejkrej | 5 | 0 | 1 | 1 |
| JunMa11 | 4 | 0 | 0 | 2 |
| Nasrine10 | 4 | 0 | 0 | 2 |
| lb815 | 3 | 0 | 0 | 2 |
| dfgdgdfgd | 3 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Pull request#1126ElpadoCan2026-06-22 14:58
- Issue#1103Teranis2026-05-21 13:41CC budding yeast errors
- Pull request#1087ElpadoCan2026-04-27 07:06
- Pull request#1085sjrct2026-04-26 05:46
- Issue comment#1067ElpadoCan2026-04-11 13:05Workflow gui
- Issue#1066ElpadoCan2026-04-11 12:19Conversion of exported video to MP4 on MacOS fails
- Pull request#1074ElpadoCan2026-04-11 11:11
- Issue comment#1067ElpadoCan2026-04-11 10:01Workflow gui
- Issue comment#1060Teranis2026-04-10 13:39General Image Preprpcessing
- Pull request#1073ElpadoCan2026-04-10 10:30
- Issue comment#1070ElpadoCan2026-04-04 07:28The bane of Cell-ACDC: `obj.centroid`
- Issue#630github-actions[bot]2026-04-04 04:24Test YeaZ_v2 on macOS with latest numpy >2.2
- Issue#652github-actions[bot]2026-04-04 04:24Memory leakage issues
- Pull request#1069Teranis2026-04-03 23:20
- Issue#670ElpadoCan2026-04-03 21:49Show multiple results in a GUI for the user to select which one
- Issue#650ElpadoCan2026-04-03 21:49Merge "Additional parameters" with "
- Issue#620ElpadoCan2026-04-03 21:46Trackastra does not work in the segmentation module for me
- Issue comment#1067Teranis2026-04-03 19:40Workflow gui
- Issue#657Teranis2026-04-02 13:38Combine "Combine channels" and "Custom Preprocess" tools
- Issue#619Teranis2026-04-02 13:37Reset Edit ID - Future frame action
- Issue comment#619Teranis2026-04-02 13:37Reset Edit ID - Future frame action
- Issue#614Teranis2026-04-02 13:34Error when activating Move Object Mask tool in the GUI
- Issue comment#610Teranis2026-04-02 13:34Seeing Phase contrast channel measurements twice in selection window
- Issue comment#499Teranis2026-04-02 13:22Handle Spacing parameters for trackpy differently?
- Issue#481Teranis2026-04-02 13:21unexpected keyword argument 'net_avg' error when loading cellpose model
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 96 stars here means stars gained during the window, not the repo's star count.