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TIDDIT - structural variant calling

active 2023-08-182026-03-22 (UTC)

Partial coverage20,503 / 26,259 hourly files (78%) · 2 absent upstream · 5,753 failed, retryable2023-08-152026-08-13 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
30
Pushes
2
Pull requests
2
Issues
8
Stars
10
Forks
2

Activity over time

Daily event counts in the loaded window

Line chart, 948 days from 2023-08-18 to 2026-03-22. Pushes: 2 total, peak 1 in a day. Pull requests: 2 total, peak 1 in a day. Issues: 8 total, peak 2 in a day. Comments: 6 total, peak 1 in a day. Stars: 10 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
J35P3127212
bounlu3001
pauline-ng2002
chlu05711000
ivadym1000
themkdemiiir1000
ramprasadn1010
gavinmonahan1001
sreerampeela1000

Recent activity

Latest issues, pull requests and releases

  • Pull request#130ramprasadn2026-03-22 10:35
  • Issue comment#130J35P3122026-03-22 10:35
    Fix race condition in fasta index creation
  • Pull request#129J35P3122025-12-08 16:06
  • Issue#127J35P3122025-12-08 15:58
    TypeError: '>=' not supported between instances of 'int' and 'str' when using `-q` parameter
  • Issue#119ivadym2025-11-26 15:42
    Publish TIDDIT 3.8.0 to Bioconda
  • Issue comment#117pauline-ng2024-07-11 00:36
    Larger CNVs being called
  • Issue comment#101pauline-ng2024-07-03 23:33
    Update Dockerfile
  • Issue comment#106gavinmonahan2024-04-11 06:36
    tiddit_variant error
  • Issue#113sreerampeela2024-03-26 05:54
    BWA index error
  • Issue#111themkdemiiir2024-02-08 08:51
    Duplicate VCF lines from HG002 BAM
  • Issue comment#110J35P3122023-12-21 11:54
    TiDDIT seems to be more sensitive in the version of index files
  • Issue#110J35P3122023-12-21 11:54
    TiDDIT seems to be more sensitive in the version of index files
  • Issue#110chlu05712023-12-21 00:23
    TiDDIT seems to be more sensitive in the version of index files
  • Issue comment#109bounlu2023-08-18 02:10
    `ValueError`: file does not contain alignment data
  • Issue#109bounlu2023-08-18 02:10
    `ValueError`: file does not contain alignment data
  • Issue#109bounlu2023-08-18 01:43
    `ValueError`: file does not contain alignment data

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 10 stars here means stars gained during the window, not the repo's star count.