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ShenLab-Genomics/SpliceTransformer

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SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence

active 2024-08-232026-04-05 (UTC)

Partial coverage14,856 / 18,120 hourly files (82%) · 2 absent upstream · 3,264 failed, retryable2024-07-172026-08-11 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
41
Pushes
2
Pull requests
0
Issues
4
Stars
21
Forks
4

Activity over time

Daily event counts in the loaded window

Line chart, 591 days from 2024-08-23 to 2026-04-05. Pushes: 2 total, peak 1 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 4 total, peak 1 in a day. Comments: 8 total, peak 3 in a day. Stars: 21 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
SilverNebula7204
Tang-pro3003
Lmmfff2001
adi88971000
yunzhang19981000

Recent activity

Latest issues, pull requests and releases

  • Issue#14yunzhang19982025-09-12 12:27
    Evaluating the model
  • Issue comment#12Lmmfff2025-08-20 05:13
    Can you provide the source code for processing raw exon-exon junction data and generating training-test dataset?
  • Issue#13Lmmfff2025-08-18 03:37
    How is the data processing for splice site utilization in each organization?
  • Issue comment#12SilverNebula2025-05-22 02:09
    Can you provide the source code for processing raw exon-exon junction data and generating training-test dataset?
  • Issue#7adi88972025-01-05 10:23
    Understand the work with splicetransformers
  • Issue comment#6SilverNebula2024-12-26 08:02
    Interpretation of outputs
  • Issue comment#1Tang-pro2024-10-24 06:57
    Has your research been public?
  • Issue comment#1SilverNebula2024-10-24 02:39
    Has your research been public?
  • Issue#1SilverNebula2024-10-24 02:39
    Has your research been public?
  • ReleaseSilverNebula2024-09-22 06:18
    SpliceTransformer v1.0.0
  • Issue comment#1Tang-pro2024-09-05 06:42
    Has your research been public?
  • Issue comment#1SilverNebula2024-09-05 06:09
    Has your research been public?
  • Issue comment#1Tang-pro2024-09-05 03:17
    Has your research been public?

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 21 stars here means stars gained during the window, not the repo's star count.