The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.
active 2023-08-30 → 2025-10-17 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 780 days from 2023-08-30 to 2025-10-17. Pushes: 0 total, peak 0 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 9 total, peak 1 in a day. Comments: 9 total, peak 4 in a day. Stars: 38 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| AlcaArctica | 4 | 0 | 0 | 3 |
| pavelToman | 2 | 0 | 0 | 2 |
| criveralopez | 2 | 0 | 0 | 0 |
| DeadlineWasYesterday | 2 | 0 | 0 | 2 |
| jfouret | 1 | 0 | 0 | 0 |
| rahulrca | 1 | 0 | 0 | 0 |
| alxsimon | 1 | 0 | 0 | 0 |
| chrisgulvik | 1 | 0 | 0 | 0 |
| praimondeau | 1 | 0 | 0 | 1 |
| jiangqiuqiuu | 1 | 0 | 0 | 0 |
| nityendra21 | 1 | 0 | 0 | 1 |
| rmormando | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#176DeadlineWasYesterday2024-12-05 13:40install LAT error
- Issue comment#176pavelToman2024-12-05 13:11install LAT error
- Issue comment#176DeadlineWasYesterday2024-12-05 13:00install LAT error
- Issue comment#176pavelToman2024-12-05 10:59install LAT error
- Issue#189chrisgulvik2024-09-05 15:40kat comp never exits - bioconda only issue(?)
- Issue#188jfouret2024-05-16 12:38Kat comp finds specific kmers between 2 fastq files with the same reads not given in the same order (with a reproducible example)
- Issue#187criveralopez2024-03-25 16:47KAT won't plot the hist spectra
- Issue comment#178praimondeau2024-03-20 19:15TypeError: object of type 'NoneType' has no len()
- Issue#186alxsimon2024-03-09 17:30kat comp core dumped "corrupted double-linked list"
- Issue comment#185AlcaArctica2024-01-05 16:10no genome size estimation result
- Issue#185AlcaArctica2024-01-05 10:11no genome size estimation result
- Issue#184jiangqiuqiuu2023-12-10 21:43NeedHelpIntepretingResults
- Issue#183rahulrca2023-12-05 23:27kmer analysis with more than 6 x ploidy level of the genome
- Issue comment#182AlcaArctica2023-11-23 13:36limit X-axis of kat hist plot
- Issue comment#167nityendra212023-10-26 05:36malloc_consolidate(): unaligned fastbin chunk detected
- Issue#181rmormando2023-10-17 18:00can't install with brew
- Issue comment#142AlcaArctica2023-09-28 13:30Signal 11 error at the end of kat gcp command
- Issue#180criveralopez2023-09-05 09:15Plotting issue using kat plot spectra-hist function
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 38 stars here means stars gained during the window, not the repo's star count.