A protein language model for learning the SARS-CoV-2 fitness landscape
active 2024-03-20 → 2025-12-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 637 days from 2024-03-20 to 2025-12-16. Pushes: 33 total, peak 8 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 5 total, peak 1 in a day. Comments: 5 total, peak 4 in a day. Stars: 10 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| AdamInTokyo | 29 | 25 | 0 | 3 |
| ijampei | 5 | 5 | 0 | 0 |
| PabloOfEpidemiology | 4 | 0 | 0 | 2 |
| suga-mai | 3 | 3 | 0 | 0 |
| smtnkc | 1 | 0 | 0 | 0 |
| khyox | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#4smtnkc2025-12-16 05:02CoVFit noDMS model
- Issue#3khyox2025-08-21 06:24Missing clade_cutoff_for_cutoff_sliding.txt file
- Issue#2PabloOfEpidemiology2024-08-22 05:18Failure to summarise haplotype information
- Issue comment#2PabloOfEpidemiology2024-06-05 09:40Failure to summarise haplotype information
- Issue comment#2AdamInTokyo2024-06-05 09:33Failure to summarise haplotype information
- Issue comment#2PabloOfEpidemiology2024-06-05 09:16Failure to summarise haplotype information
- Issue comment#2AdamInTokyo2024-06-05 09:13Failure to summarise haplotype information
- Issue#2PabloOfEpidemiology2024-06-04 09:34Failure to summarise haplotype information
- Issue#1AdamInTokyo2024-04-03 05:16where to find the "DA_model/model_uniESM2_650M_DA_combo_e30_lrsWarmupCosine" file?
- Issue comment#1AdamInTokyo2024-04-02 12:01where to find the "DA_model/model_uniESM2_650M_DA_combo_e30_lrsWarmupCosine" file?
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 10 stars here means stars gained during the window, not the repo's star count.