SARS-CoV-2 Recombination Viewer and Tracker
active 2023-08-29 → 2025-10-31 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 795 days from 2023-08-29 to 2025-10-31. Pushes: 33 total, peak 5 in a day. Pull requests: 5 total, peak 2 in a day. Issues: 11 total, peak 4 in a day. Comments: 10 total, peak 4 in a day. Stars: 3 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| mrkylesmith | 31 | 15 | 5 | 7 |
| github-actions[bot] | 18 | 18 | 0 | 0 |
| mlarjim | 3 | 0 | 0 | 1 |
| yatisht | 2 | 0 | 0 | 2 |
| yanjin1234 | 2 | 0 | 0 | 0 |
| corneliusroemer | 2 | 0 | 0 | 0 |
| fgmp | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Releasemrkylesmith2024-12-14 06:57v0.2.0
- Issue comment#13mlarjim2024-08-13 06:36Empty snps track in local web
- Issue comment#13mrkylesmith2024-08-12 16:19Empty snps track in local web
- Pull request#14mrkylesmith2024-08-12 16:11
- Issue#13mlarjim2024-08-09 11:57Empty snps track in local web
- Issue#12mlarjim2024-08-06 12:16socket.gaierror: [Errno -3]
- Issue#9mrkylesmith2024-07-09 14:16Missing samples_descend.txt file of Full Tree?
- Issue#6mrkylesmith2024-07-09 14:16ENH: Publish machine readable table with all strain names of inferred recombinants, for quick search
- Issue comment#5mrkylesmith2024-07-09 14:15ENH: Add number of children below each node (both for donors and recombinant)
- Issue#5mrkylesmith2024-07-09 14:15ENH: Add number of children below each node (both for donors and recombinant)
- Issue comment#4mrkylesmith2024-07-09 14:12I installed docker but still can not work.
- Issue#4mrkylesmith2024-07-09 14:12I installed docker but still can not work.
- Issue comment#10mrkylesmith2024-07-09 14:09How should QC Flags be interpreted and used?
- Issue comment#9mrkylesmith2024-07-09 13:31Missing samples_descend.txt file of Full Tree?
- Issue#11yanjin12342024-06-25 09:07docker run -it mrkylesmith/ripples_pipeline:latest Failed.
- Issue#11yanjin12342024-06-15 09:12docker run -it mrkylesmith/ripples_pipeline:latest Failed.
- Issue#10fgmp2024-04-26 08:46How should QC Flags be interpreted and used?
- Pull request#8mrkylesmith2024-02-29 20:59
- Pull request#8mrkylesmith2024-02-29 20:53
- Issue comment#6mrkylesmith2024-02-13 17:16ENH: Publish machine readable table with all strain names of inferred recombinants, for quick search
- Issue comment#5mrkylesmith2024-02-11 21:01ENH: Add number of children below each node (both for donors and recombinant)
- Pull request#7mrkylesmith2024-01-16 17:25
- Pull request#7mrkylesmith2024-01-16 16:44
- Issue comment#4yatisht2023-12-20 19:48I installed docker but still can not work.
- Issue comment#6yatisht2023-12-20 19:46ENH: Publish machine readable table with all strain names of inferred recombinants, for quick search
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.