R package for multiple sequence alignment
active 2023-08-31 → 2026-06-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1011 days from 2023-08-31 to 2026-06-06. Pushes: 32 total, peak 5 in a day. Pull requests: 4 total, peak 1 in a day. Issues: 19 total, peak 2 in a day. Comments: 34 total, peak 4 in a day. Stars: 14 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| UBod | 69 | 32 | 3 | 21 |
| JAMKuttan | 3 | 0 | 0 | 2 |
| hpages | 2 | 0 | 0 | 2 |
| HaonanD | 2 | 0 | 0 | 1 |
| OrangeyO2 | 2 | 0 | 0 | 1 |
| JulianRozenberg | 2 | 0 | 0 | 2 |
| antoine4ucsd | 2 | 0 | 0 | 2 |
| KlausVigo | 2 | 0 | 0 | 1 |
| moa4020 | 1 | 0 | 0 | 0 |
| Rong-Zh | 1 | 0 | 1 | 0 |
| zhuldyzhanzak | 1 | 0 | 0 | 0 |
| msubirana | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#42hpages2026-06-06 22:56MultipleAlignment objects have moved to their own package
- Issue comment#41KlausVigo2025-11-13 08:27alignment looses names if read from file
- Issue#41KlausVigo2025-11-11 09:11alignment looses names if read from file
- Issue comment#37UBod2025-09-03 10:38The ProfileFromMSA and DeleteProgNode functions seem to have a memory leak.
- Pull request#38UBod2025-09-03 10:19
- Issue#37UBod2025-09-03 08:17The ProfileFromMSA and DeleteProgNode functions seem to have a memory leak.
- Issue comment#40UBod2025-09-03 08:13msa under parallel conditions can lead to OUT OF MEMORY.
- Issue comment#40HaonanD2025-09-03 07:59msa under parallel conditions can lead to OUT OF MEMORY.
- Issue#40UBod2025-09-02 06:45msa under parallel conditions can lead to OUT OF MEMORY.
- Issue#40HaonanD2025-09-02 05:58msa under parallel conditions can lead to OUT OF MEMORY.
- Issue comment#39UBod2025-09-01 07:56msa failing to build on macOS arm64
- Issue comment#39UBod2025-08-28 11:56msa failing to build on macOS arm64
- Issue#39UBod2025-08-28 11:56msa failing to build on macOS arm64
- Issue comment#38UBod2025-08-06 15:06Fix memory leak
- Issue comment#37UBod2025-08-06 15:05The ProfileFromMSA and DeleteProgNode functions seem to have a memory leak.
- Issue#37UBod2025-08-06 15:05The ProfileFromMSA and DeleteProgNode functions seem to have a memory leak.
- Issue comment#39UBod2025-07-21 14:11msa failing to build on macOS arm64
- Issue#39zachpwakefield2025-07-21 14:04msa failing to build on macOS arm64
- Issue comment#30UBod2025-07-11 11:53MSA::SetIdCount: cannot increase count
- Issue comment#30antoine4ucsd2025-07-11 11:51MSA::SetIdCount: cannot increase count
- Issue comment#30antoine4ucsd2025-07-11 06:56MSA::SetIdCount: cannot increase count
- Issue comment#30UBod2025-07-11 05:41MSA::SetIdCount: cannot increase count
- Pull request#38Rong-Zh2025-05-12 06:31
- Issue comment#35UBod2025-04-09 07:34Memory not mapped error when aligning to profile1
- Issue#35UBod2025-04-09 07:10Memory not mapped error when aligning to profile1
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 14 stars here means stars gained during the window, not the repo's star count.