R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling
active 2023-08-15 → 2026-07-21 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1072 days from 2023-08-15 to 2026-07-21. Pushes: 38 total, peak 8 in a day. Pull requests: 19 total, peak 5 in a day. Issues: 9 total, peak 3 in a day. Comments: 16 total, peak 5 in a day. Stars: 6 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| devonjkohler | 36 | 21 | 9 | 3 |
| tonywu1999 | 14 | 7 | 7 | 0 |
| deril2605 | 11 | 9 | 2 | 0 |
| mstaniak | 8 | 1 | 1 | 4 |
| coderabbitai[bot] | 8 | 0 | 0 | 5 |
| gigi-mt | 3 | 0 | 0 | 2 |
| Maithy15 | 1 | 0 | 0 | 0 |
| Tahyne | 1 | 0 | 0 | 1 |
| Bicun1909 | 1 | 0 | 0 | 0 |
| gprosales | 1 | 0 | 0 | 0 |
| SamThilmany | 1 | 0 | 0 | 0 |
| TaliaHead | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Pull request#90tonywu19992025-07-28 21:43
- Pull request#90tonywu19992025-07-28 15:48
- Pull request#88tonywu19992025-06-26 17:58
- Issue comment#89coderabbitai[bot]2025-06-25 17:02ci(dry-run): Add dry run build and PR template
- Pull request#89tonywu19992025-06-25 17:01
- Pull request#88tonywu19992025-06-24 00:57
- Issue#87SamThilmany2025-03-19 10:14`PDtoMSstatsTMTFormat` Fails with CHIMERYS Data from Proteome Discoverer
- Pull request#86devonjkohler2025-03-05 15:30
- Pull request#86devonjkohler2025-03-05 15:30
- Issue comment#83TaliaHead2024-12-25 21:13Error in MaxQuant annotation file
- Pull request#85devonjkohler2024-11-14 20:55
- Pull request#85devonjkohler2024-11-14 20:55
- Pull request#84tonywu19992024-11-13 02:35
- Pull request#84tonywu19992024-11-02 15:44
- Issue#83Maithy152024-10-19 12:31Error in MaxQuant annotation file
- Pull request#82devonjkohler2024-05-20 21:59
- Pull request#82devonjkohler2024-05-20 21:59
- Pull request#80devonjkohler2024-05-20 20:42
- Pull request#81devonjkohler2024-05-20 20:41
- Pull request#81devonjkohler2024-05-20 20:41
- Pull request#79mstaniak2024-04-11 13:09
- Pull request#77deril26052024-03-27 22:55
- Issue#78Bicun19092023-11-20 04:31Exporting the protein-level data
- Issue#73devonjkohler2023-10-19 17:09input.mq does not extract Condition information from annotation file
- Issue comment#61devonjkohler2023-10-19 17:09MSstatsTMT within the shiny tool with MQ data crashes
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 6 stars here means stars gained during the window, not the repo's star count.