Python tool for the analysis and visualization of mobile genetic elements
active 2023-11-02 → 2025-09-03 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 672 days from 2023-11-02 to 2025-09-03. Pushes: 15 total, peak 5 in a day. Pull requests: 2 total, peak 2 in a day. Issues: 11 total, peak 2 in a day. Comments: 13 total, peak 2 in a day. Stars: 2 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| W-L | 31 | 15 | 2 | 9 |
| Anouk-vw | 3 | 0 | 0 | 1 |
| alicegodden | 2 | 0 | 0 | 1 |
| SianaLarue | 2 | 0 | 0 | 1 |
| ebhmayra | 1 | 0 | 0 | 1 |
| guosongjia | 1 | 0 | 0 | 0 |
| simonorozcoarias | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#3W-L2025-06-29 05:38Diversity Estimates
- Issue#19W-L2025-06-29 05:38The latest version deviaTE is not accessible through pip install
- Issue comment#19W-L2025-06-28 07:52The latest version deviaTE is not accessible through pip install
- Issue#19guosongjia2025-06-28 03:18The latest version deviaTE is not accessible through pip install
- Issue#10W-L2025-05-26 20:24Won't identify TEs that are created with EDTA for non-model organism
- Issue comment#12W-L2025-05-26 20:23Error in install.packages("data.table", repos = rep) : unable to install packages
- Issue#12W-L2025-05-26 20:23Error in install.packages("data.table", repos = rep) : unable to install packages
- Issue comment#18W-L2025-05-26 20:20TE families with special characters in FASTA headers are silently ignored
- Issue comment#18W-L2025-05-23 13:24TE families with special characters in FASTA headers are silently ignored
- Issue comment#18W-L2025-05-23 08:23TE families with special characters in FASTA headers are silently ignored
- Issue#18simonorozcoarias2025-05-23 06:53TE families with special characters in FASTA headers are silently ignored
- Issue comment#17W-L2024-10-04 10:11--thread parameter not taken into account by the command (+ question on long reads)
- Issue#17W-L2024-10-04 10:11--thread parameter not taken into account by the command (+ question on long reads)
- Issue comment#17SianaLarue2024-10-03 06:30--thread parameter not taken into account by the command (+ question on long reads)
- Issue#17SianaLarue2024-10-01 11:44--thread parameter not taken into account by the command (+ question on long reads)
- Pull request#16W-L2024-04-30 10:12
- Pull request#16W-L2024-04-30 10:11
- Issue comment#15Anouk-vw2024-04-12 09:37Issue with --input_bam_dir
- Issue#15Anouk-vw2024-04-12 09:37Issue with --input_bam_dir
- Issue comment#15W-L2024-04-12 09:14Issue with --input_bam_dir
- Issue#15Anouk-vw2024-04-12 08:55Issue with --input_bam_dir
- Issue comment#14W-L2024-02-06 08:56Stuck on prep stage
- Issue comment#14alicegodden2024-02-03 14:35Stuck on prep stage
- Issue comment#14W-L2024-02-02 10:42Stuck on prep stage
- Issue#14alicegodden2024-02-02 09:14Stuck on prep stage
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.