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NanoRepeat: fast and accurate analysis of Short Tandem Repeats (STRs) from Oxford Nanopore sequencing data

active 2023-08-152026-02-12 (UTC)

Complete coverage26,732 / 26,732 hourly files (100%) · 2 absent upstream2023-08-152026-09-01 (UTC)
Events
70
Pushes
12
Pull requests
0
Issues
17
Stars
11
Forks
1

Activity over time

Daily event counts in the loaded window

Line chart, 913 days from 2023-08-15 to 2026-02-12. Pushes: 12 total, peak 2 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 17 total, peak 2 in a day. Comments: 23 total, peak 3 in a day. Stars: 11 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
fangli802511012
fansalon7004
HLHsieh6002
kaichop4102
18parkky3000
Y-Pei3001
SeAudet2001
ymcki1000
eostrow1001

Recent activity

Latest issues, pull requests and releases

  • Issue#21fangli802026-02-12 21:29
    Issue parsing bed file
  • Issue comment#21fangli802026-02-12 21:29
    Issue parsing bed file
  • Issue comment#21SeAudet2026-01-12 19:25
    Issue parsing bed file
  • Issue#21SeAudet2025-09-22 00:29
    Issue parsing bed file
  • Issue comment#20fangli802025-09-10 15:17
    --no_details option not working
  • Issue#20fangli802025-09-10 15:17
    --no_details option not working
  • Releasefangli802025-09-10 07:29
    NanoRepeat-1.8.2
  • Issue#19HLHsieh2025-04-11 05:00
    Handling of loci with interruptions and complex motifs
  • Issue#18fansalon2024-12-17 12:22
    nanorepeat "freezing"
  • Issue comment#18fansalon2024-12-17 12:04
    nanorepeat "freezing"
  • Issue comment#18fangli802024-12-14 15:11
    nanorepeat "freezing"
  • Issue comment#18fansalon2024-12-14 14:49
    nanorepeat "freezing"
  • Issue comment#18fangli802024-12-13 17:32
    nanorepeat "freezing"
  • Issue#18fansalon2024-12-13 08:47
    nanorepeat "freezing"
  • Issue comment#17fansalon2024-12-06 22:24
    Read_Repeat_Size equals -1
  • Issue comment#17fangli802024-12-06 11:40
    Read_Repeat_Size equals -1
  • Issue comment#17fansalon2024-12-04 10:19
    Read_Repeat_Size equals -1
  • Issue comment#17fangli802024-12-04 02:39
    Read_Repeat_Size equals -1
  • Issue#17fansalon2024-12-02 14:27
    Read_Repeat_Size equals -1
  • Issue comment#9eostrow2024-08-26 02:03
    Are there any plan to add support for repeat unit with IUPAC nucleotides?
  • Issue#16HLHsieh2024-07-23 03:49
    General questions
  • Issue comment#16HLHsieh2024-07-23 03:49
    General questions
  • Issue comment#16fangli802024-07-23 02:03
    General questions
  • Issue#16HLHsieh2024-07-22 05:06
    General questions
  • Issue comment#15kaichop2024-07-18 03:47
    No expectation output

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 11 stars here means stars gained during the window, not the repo's star count.