Orchestrating high-dimensional cell morphology data processing pipelines
active 2023-08-22 → 2025-04-05 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 593 days from 2023-08-22 to 2025-04-05. Pushes: 3 total, peak 2 in a day. Pull requests: 7 total, peak 3 in a day. Issues: 14 total, peak 4 in a day. Comments: 101 total, peak 33 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| axiomcura | 72 | 3 | 7 | 28 |
| gwaybio | 53 | 0 | 0 | 47 |
| d33bs | 34 | 0 | 0 | 24 |
| MikeLippincott | 4 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Issue#99axiomcura2024-01-03 17:12Plate Map Search Error in Cytosnake Workflow
- Issue#98axiomcura2023-12-28 22:57CytoSnake crashes when using `.parquet` profiles.
- Issue comment#89axiomcura2023-12-28 22:43Remove iteration process in `feature_select`
- Issue comment#90axiomcura2023-11-08 21:47Benchmarking Workflows in Cytosnake with Memray 📊
- Issue#96axiomcura2023-11-08 21:45Add Unit testing documentation
- Issue#95axiomcura2023-11-08 21:09Reduce Code Duplication Due To Profiling Design
- Issue#94axiomcura2023-11-08 20:45Create CI workflows to test on other types of OS
- Pull request#90axiomcura2023-10-19 22:29
- Issue#89axiomcura2023-10-19 20:48Remove iteration process in `feature_select`
- Pull request#78axiomcura2023-09-01 23:09
- Issue comment#78axiomcura2023-09-01 23:09Making CytoSnake Conda Installable.
- Issue#88axiomcura2023-09-01 22:31Use CI/CD tools to automatically synchronize the Bioconda version
- Releaseaxiomcura2023-09-01 22:210.0.2
- Releaseaxiomcura2023-09-01 22:19intial release
- Issue comment#87axiomcura2023-09-01 22:13CytoSnake Bug Fixes From Cell-Health Data Usage
- Pull request#87axiomcura2023-09-01 22:13
- Pull request#87axiomcura2023-09-01 20:12
- Issue#86axiomcura2023-09-01 19:51Revamping `get_input_path()`
- Issue#85axiomcura2023-09-01 19:21CytoSnake modules fails when using multiple inputs and generating one output due to `get_data_path()`
- Issue#84axiomcura2023-09-01 18:40Update data storage locations
- Issue comment#81axiomcura2023-09-01 13:11Allow whole config loading to scripts instead of partial loading.
- Issue#82axiomcura2023-08-31 18:52Establishing config standards for class methods
- Issue#81axiomcura2023-08-31 18:42Allow whole config loading to scripts instead of partial loading.
- Issue comment#41axiomcura2023-08-31 18:36Reduce complexity in `CytoSnake` scripts
- Issue#80axiomcura2023-08-30 22:10_path.yaml capturing empty keys
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.