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circular RNA analysis toolset

active 2023-08-182026-01-21 (UTC)

Partial coverage20,512 / 26,268 hourly files (78%) · 2 absent upstream · 5,753 failed, retryable2023-08-152026-08-13 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
36
Pushes
1
Pull requests
0
Issues
11
Stars
11
Forks
2

Activity over time

Daily event counts in the loaded window

Line chart, 888 days from 2023-08-18 to 2026-01-21. Pushes: 1 total, peak 1 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 11 total, peak 2 in a day. Comments: 11 total, peak 3 in a day. Stars: 11 total, peak 2 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
kepbod10106
nadzhou2001
jaberdehghani642001
Kiliankleemann2000
spazm51001
xingma1001
junjunlab1000
andre-gabriel-421000
erdaqorri1001
frankligy1000
202533bioliu1000

Recent activity

Latest issues, pull requests and releases

  • Issue#79Kiliankleemann2025-11-05 04:35
    Count output with STAR align and subsequent parse and annotate not clear.
  • Issue#79Kiliankleemann2025-11-05 03:45
    Count output with STAR align and subsequent parse and annotate not clear.
  • Issue comment#78kepbod2025-06-16 15:11
    Version 2.3.8 with STAR
  • Issue#78kepbod2025-06-16 15:11
    Version 2.3.8 with STAR
  • Issue#78202533bioliu2025-06-15 22:27
    Version 2.3.8 with STAR
  • Issue comment#66spazm52025-05-09 22:27
    why the CIRCexplorer2 is so slow
  • Issue comment#76kepbod2024-09-08 14:04
    Update pybedtools requirement.
  • Issue#76kepbod2024-09-08 14:04
    Update pybedtools requirement.
  • Issue comment#76nadzhou2024-09-08 04:34
    Update pybedtools requirement.
  • Issue#76nadzhou2024-09-08 04:33
    Update pybedtools requirement.
  • Issue comment#62kepbod2024-03-08 01:33
    What is hg19_ref_all.txt file?
  • Issue#62kepbod2024-03-08 01:33
    What is hg19_ref_all.txt file?
  • Issue comment#62erdaqorri2024-03-07 07:42
    What is hg19_ref_all.txt file?
  • Issue#75frankligy2024-01-20 19:33
    interpret circRNA coordinate
  • Issue#74andre-gabriel-422023-11-22 18:15
    Reads per gene vs annotation file generated with CIRCexplorer2
  • Issue comment#73xingma2023-11-08 02:09
    Annotation with 0 fusions junctions (STAR alignment)
  • Issue comment#70jaberdehghani642023-08-24 07:32
    IndexError: list index out of range.
  • Issue comment#70kepbod2023-08-24 00:30
    IndexError: list index out of range.
  • Issue comment#69kepbod2023-08-24 00:25
    Convert paired-end RNA-seq to single-read RNA-seq?
  • Issue#70jaberdehghani642023-08-23 16:24
    IndexError: list index out of range.
  • Issue comment#69kepbod2023-08-21 03:41
    Convert paired-end RNA-seq to single-read RNA-seq?
  • Issue#69junjunlab2023-08-18 09:24
    Convert paired-end RNA-seq to single-read RNA-seq?

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 11 stars here means stars gained during the window, not the repo's star count.