Code for "UCS: a unified approach to cell segmentation for subcellular spatial transcriptomics"
active 2024-06-29 → 2026-01-04 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 555 days from 2024-06-29 to 2026-01-04. Pushes: 7 total, peak 3 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 19 total, peak 2 in a day. Comments: 30 total, peak 4 in a day. Stars: 8 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| chenyhvvvv | 29 | 7 | 0 | 18 |
| Liyongheng-03 | 14 | 0 | 0 | 8 |
| dertrotl | 3 | 0 | 0 | 1 |
| devianggr | 3 | 0 | 0 | 2 |
| anuradhabasyal | 2 | 0 | 0 | 1 |
| hahia | 1 | 0 | 0 | 0 |
| falsetry1514 | 1 | 0 | 0 | 0 |
| Renpeng007 | 1 | 0 | 0 | 0 |
| rushin682 | 1 | 0 | 0 | 0 |
| ajinkya-kulkarni | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#13Liyongheng-032025-08-26 06:40Square artifacts on Spatial Genomics Data
- Issue comment#13chenyhvvvv2025-08-05 02:40Square artifacts on Spatial Genomics Data
- Issue comment#12chenyhvvvv2025-08-05 02:39How to run it for Visium HD
- Issue comment#13anuradhabasyal2025-08-05 02:34Square artifacts on Spatial Genomics Data
- Issue comment#13chenyhvvvv2025-08-05 02:26Square artifacts on Spatial Genomics Data
- Issue#13anuradhabasyal2025-08-04 16:20Square artifacts on Spatial Genomics Data
- Issue comment#11Liyongheng-032025-06-05 01:31the recommended parameters for the CosMx Human Pancreas dataset
- Issue#10chenyhvvvv2025-05-22 07:49License to use this repo?
- Issue comment#10chenyhvvvv2025-05-22 07:49License to use this repo?
- Issue#10ajinkya-kulkarni2025-05-12 18:10License to use this repo?
- Issue#9Liyongheng-032025-04-23 02:07Inquiry about computation time in Figure 4(d)
- Issue comment#9Liyongheng-032025-04-23 02:07Inquiry about computation time in Figure 4(d)
- Issue comment#9Liyongheng-032025-04-22 10:07Inquiry about computation time in Figure 4(d)
- Issue comment#9Liyongheng-032025-04-22 10:04Inquiry about computation time in Figure 4(d)
- Issue comment#9chenyhvvvv2025-04-22 09:44Inquiry about computation time in Figure 4(d)
- Issue#9Liyongheng-032025-04-22 09:40Inquiry about computation time in Figure 4(d)
- Issue#8Liyongheng-032025-03-27 02:01Potential Coordinate Rounding Precision Issue in Xenium Processing
- Issue comment#8Liyongheng-032025-03-22 07:39Potential Coordinate Rounding Precision Issue in Xenium Processing
- Issue comment#8Liyongheng-032025-03-18 15:20Potential Coordinate Rounding Precision Issue in Xenium Processing
- Issue comment#8chenyhvvvv2025-03-18 13:16Potential Coordinate Rounding Precision Issue in Xenium Processing
- Issue comment#8Liyongheng-032025-03-18 13:03Potential Coordinate Rounding Precision Issue in Xenium Processing
- Issue comment#8chenyhvvvv2025-03-18 11:06Potential Coordinate Rounding Precision Issue in Xenium Processing
- Issue comment#8chenyhvvvv2025-03-17 13:34Potential Coordinate Rounding Precision Issue in Xenium Processing
- Issue#8Liyongheng-032025-03-17 12:59Potential Coordinate Rounding Precision Issue in Xenium Processing
- Issue#7Liyongheng-032025-03-10 10:46how to find DAPI and Transcript image
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 8 stars here means stars gained during the window, not the repo's star count.