Skip the peaks and expose RNA-binding in CLIP data
active 2023-09-13 → 2026-07-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1028 days from 2023-09-13 to 2026-07-06. Pushes: 50 total, peak 4 in a day. Pull requests: 17 total, peak 5 in a day. Issues: 28 total, peak 3 in a day. Comments: 61 total, peak 5 in a day. Stars: 3 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| byee4 | 48 | 13 | 12 | 21 |
| augustboyle | 29 | 0 | 0 | 19 |
| howardxu520 | 24 | 23 | 1 | 0 |
| Raif-fl | 13 | 12 | 1 | 0 |
| FionaMoon | 12 | 0 | 0 | 7 |
| algaebrown | 11 | 2 | 3 | 5 |
| MSajek | 6 | 0 | 0 | 3 |
| zhenyu7500 | 5 | 0 | 0 | 2 |
| Lindky | 2 | 0 | 0 | 1 |
| evanb-exai | 2 | 0 | 0 | 2 |
| yos-hida | 1 | 0 | 0 | 0 |
| VandaLovejoy | 1 | 0 | 0 | 1 |
| gorette11 | 1 | 0 | 0 | 0 |
| yvazirabad | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#57augustboyle2026-02-17 17:22Error when running skipper in paired end mode
- Pull request#56Raif-fl2025-12-17 22:17
- Issue comment#54byee42025-12-13 18:19Add env-modules to problematic environments
- Pull request#52byee42025-11-07 21:14
- Issue#46augustboyle2025-07-05 20:46Manifest file structure for PE100 Illumina reads in Skipper
- Issue comment#51VandaLovejoy2025-05-28 18:29Remapping all IP_* labels back to IP_2
- Pull request#50byee42025-05-17 00:34
- Pull request#50byee42025-05-17 00:20
- Pull request#49byee42025-05-17 00:12
- Pull request#49byee42025-05-17 00:12
- Pull request#47byee42025-05-17 00:10
- Issue comment#47algaebrown2025-05-13 03:28Compatible with snakemake 9. Can run end-to-end with all the GPU rules
- Issue comment#47byee42025-05-03 00:41Compatible with snakemake 9. Can run end-to-end with all the GPU rules
- Issue comment#47byee42025-04-27 22:35Compatible with snakemake 9. Can run end-to-end with all the GPU rules
- Issue comment#47byee42025-04-27 17:52Compatible with snakemake 9. Can run end-to-end with all the GPU rules
- Pull request#47algaebrown2025-04-22 02:43
- Issue#46gorette112025-04-06 15:11Manifest file structure for PE100 Illumina reads in Skipper
- Issue#42augustboyle2025-03-30 21:26Unable to make skipper environment
- Issue#43augustboyle2025-03-30 21:25Does Skipper Account for Batch Effects When Using Replicates?
- Issue#45augustboyle2025-03-30 21:24Errors in snakemake rule:call_enriched_windows,start from 3 rep bams
- Issue comment#41augustboyle2024-12-21 21:16RE: Generating a salmon quantified file for generating cell type specific annotation
- Issue#39augustboyle2024-12-06 04:56Handling Consecutive Enriched Windows as Merged Peaks
- Issue comment#41augustboyle2024-12-06 04:56RE: Generating a salmon quantified file for generating cell type specific annotation
- Issue#40zhenyu75002024-11-23 09:03Questions about the peakoutput columns in reproducible_enriched_windows directory
- Issue comment#35byee42024-11-04 00:09Hi Brian, please test my code on skipper + ML + genetics stuffs
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.