forking YosefLab/Hotspot as a base to apply this to miloDE
active 2023-08-16 → 2026-03-20 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 948 days from 2023-08-16 to 2026-03-20. Pushes: 17 total, peak 11 in a day. Pull requests: 8 total, peak 3 in a day. Issues: 19 total, peak 2 in a day. Comments: 26 total, peak 3 in a day. Stars: 78 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| deto | 23 | 6 | 4 | 6 |
| adamgayoso | 12 | 11 | 1 | 0 |
| lefterov | 3 | 0 | 0 | 3 |
| caitsimop | 3 | 0 | 0 | 1 |
| tanliwei-genomics-cn | 2 | 0 | 0 | 1 |
| LevyNat | 2 | 0 | 1 | 1 |
| yuanjianwen-gif | 2 | 0 | 0 | 2 |
| justjhong | 2 | 0 | 1 | 1 |
| amissarova | 2 | 0 | 0 | 1 |
| solivehong | 1 | 0 | 0 | 0 |
| Antidington | 1 | 0 | 0 | 0 |
| wangjiawen2013 | 1 | 0 | 0 | 0 |
| tanliwei-coder | 1 | 0 | 0 | 1 |
| LongpanICR | 1 | 0 | 0 | 0 |
| ZhangZao-HB | 1 | 0 | 0 | 0 |
| yuanwxu | 1 | 0 | 0 | 1 |
| liuxiawei | 1 | 0 | 0 | 1 |
| AdotaLover | 1 | 0 | 0 | 1 |
| yangqianq | 1 | 0 | 0 | 1 |
| DiDeoxy | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#56justjhong2026-03-20 00:40Add GPU support for compute_autocorrelations and compute_local_correlations
- Pull request#56justjhong2026-03-20 00:34
- Issue#54deto2026-03-20 00:28hs.compute_autocorrelations() error: AttributeError: 'csc_matrix' object has no attribute 'A'
- Issue#55LongpanICR2026-01-02 18:25Any suggestion about hotspot analysis on scATAC data
- Issue#53JWJ131643285572025-11-11 01:57R
- Issue comment#43yuanjianwen-gif2025-08-29 09:41Supporting the analysis of multi-sample SRT data
- Issue comment#43yuanjianwen-gif2025-08-29 08:18Supporting the analysis of multi-sample SRT data
- Issue#52DiDeoxy2025-07-17 16:01I made a faster Hotspot package by creating Rust bindings
- Issue comment#50lefterov2025-06-02 20:51ModuleNotFoundError: No module named 'hotspotsc' despite successful pip install (macOS)
- Issue comment#50lefterov2025-06-02 01:15ModuleNotFoundError: No module named 'hotspotsc' despite successful pip install (macOS)
- Issue comment#50lefterov2025-06-02 00:52ModuleNotFoundError: No module named 'hotspotsc' despite successful pip install (macOS)
- Issue comment#50deto2025-06-01 22:52ModuleNotFoundError: No module named 'hotspotsc' despite successful pip install (macOS)
- Issue comment#50deto2025-06-01 19:00ModuleNotFoundError: No module named 'hotspotsc' despite successful pip install (macOS)
- Issue#50deto2025-06-01 19:00ModuleNotFoundError: No module named 'hotspotsc' despite successful pip install (macOS)
- Issue comment#39tanliwei-coder2025-04-21 01:34Release a new version
- Issue comment#48deto2025-04-19 04:41New release to assure Scipy compatibility
- Issue#48deto2025-04-19 04:41New release to assure Scipy compatibility
- Issue comment#39deto2025-04-19 04:41Release a new version
- Issue#39deto2025-04-19 04:41Release a new version
- Releasedeto2025-04-19 04:37v1.1.3
- Pull request#49deto2025-04-19 04:25
- Pull request#49deto2025-04-19 04:21
- Pull request#47deto2025-04-19 04:21
- Issue#48mbruhns2025-04-14 06:36New release to assure Scipy compatibility
- Issue comment#43Li-ZhiD2025-03-05 09:32Supporting the analysis of multi-sample SRT data
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 78 stars here means stars gained during the window, not the repo's star count.