:dart: ChIP peak Annotation, Comparison and Visualization
active 2023-08-17 → 2026-04-09 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 967 days from 2023-08-17 to 2026-04-09. Pushes: 24 total, peak 5 in a day. Pull requests: 16 total, peak 6 in a day. Issues: 29 total, peak 1 in a day. Comments: 28 total, peak 4 in a day. Stars: 66 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| GuangchuangYu | 34 | 24 | 7 | 3 |
| gaospecial | 12 | 0 | 6 | 5 |
| MingLi-929 | 4 | 0 | 1 | 3 |
| HAOXUANmogu | 4 | 0 | 0 | 3 |
| RisaWatanabe | 3 | 0 | 0 | 1 |
| lucolotto | 2 | 0 | 0 | 1 |
| teryyoung | 2 | 0 | 0 | 0 |
| Krithika-Bhuvan | 2 | 0 | 0 | 1 |
| AJqd | 2 | 0 | 0 | 2 |
| YujingLin123 | 2 | 0 | 0 | 1 |
| hanguojun007 | 1 | 0 | 0 | 0 |
| ChristophH | 1 | 0 | 0 | 1 |
| haibol2016 | 1 | 0 | 1 | 0 |
| pocession | 1 | 0 | 0 | 0 |
| santataRU | 1 | 0 | 0 | 0 |
| JeasonHe-Bot | 1 | 0 | 0 | 0 |
| Sherry520 | 1 | 0 | 0 | 0 |
| Serine94209792 | 1 | 0 | 0 | 1 |
| Dragonlongzhilin | 1 | 0 | 0 | 0 |
| Panzer-vor-08 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#252tbiuliwo2026-04-09 09:38annotation cols is different with transcriptId cols
- Issue#268JeasonHe-Bot2026-01-28 03:57plotAnnoBar warning message
- Pull request#267haibol20162026-01-01 01:28
- Issue#264YujingLin1232025-10-31 03:00Could not find a valid path to the orthofinder program from R.
- Issue#260santataRU2025-09-08 04:57ChIPseeker annotation: adding a "multiple" category if a cluster overlaps with multiple features (e.g. exons and introns)
- Issue comment#256RisaWatanabe2025-06-13 02:42warning 'Unknown ID type, gene annotation will not be added' in annotatePeak
- Issue#256RisaWatanabe2025-06-13 02:42warning 'Unknown ID type, gene annotation will not be added' in annotatePeak
- Issue#256RisaWatanabe2025-06-11 22:30warning 'Unknown ID type, gene annotation will not be added' in annotatePeak
- Issue comment#255lucolotto2025-05-31 06:27Inconsistent annotation
- Issue#255lucolotto2025-05-14 07:56Inconsistent annotation
- Issue comment#224sunv282025-03-22 08:45When using enrichPeakOverlap, why the p values of different target peaks are same?
- Issue#253cxtaslim2025-03-20 17:40how to add title to plotAnnoPie
- Issue#252teryyoung2025-03-17 03:52annotation cols is different with transcriptId cols
- Issue#251teryyoung2025-03-15 09:47Parts of peaks isnt annotated. length of annotated object is short than peakfiles.
- Issue comment#250Serine942097922025-01-25 09:46Error in cursor:(cursor + seq - 1) : result would be too long a vector running plotPeakProf2
- Issue#250johannesnicolaus2025-01-22 03:01Error in cursor:(cursor + seq - 1) : result would be too long a vector running plotPeakProf2
- Issue comment#85Krithika-Bhuvan2024-12-18 22:22How to change the colour of plotAvgProf output?
- Issue#249Krithika-Bhuvan2024-12-18 20:08How to get same Y axis range for plotAvgProf
- Issue#248ICE05842024-12-16 23:09chipseeker se2gene not working
- Issue comment#238weishwu2024-12-07 22:47Error: invalid subscript
- Issue comment#238YujingLin1232024-12-06 13:04Error: invalid subscript
- Issue#247xuxuefen0072024-12-05 09:17questions about the annotation results from ChIPseeker.
- Issue comment#149AJqd2024-11-05 07:01plotDistToTSS: error when trying to plot multiple objects
- Issue comment#149AJqd2024-11-05 03:52plotDistToTSS: error when trying to plot multiple objects
- Pull request#246GuangchuangYu2024-10-06 07:14
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 66 stars here means stars gained during the window, not the repo's star count.