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:microbe: A comprehensive R package for deep mining microbiome

active 2024-05-272026-06-19 (UTC)

Partial coverage15,707 / 19,437 hourly files (81%) · 2 absent upstream · 3,729 failed, retryable2024-05-242026-08-11 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
40
Pushes
6
Pull requests
0
Issues
7
Stars
20
Forks
4

Activity over time

Daily event counts in the loaded window

Line chart, 754 days from 2024-05-27 to 2026-06-19. Pushes: 6 total, peak 2 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 7 total, peak 1 in a day. Comments: 3 total, peak 1 in a day. Stars: 20 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
xiangpin7601
alienzj2000
scoob241000
altuda1000
bark92991001
Laxmi00011000
18706942491000
jianlingfan1001

Recent activity

Latest issues, pull requests and releases

  • Issue#135alienzj2025-11-30 07:59
    Very strange topn results when using MicrobiotaProcess::mp_extract_abundance
  • Issue#135alienzj2025-11-14 10:08
    Very strange topn results when using MicrobiotaProcess::mp_extract_abundance
  • Issue#97Rainjie-afk2025-07-22 09:27
    Two question about import qiime2 files
  • Issue comment#78bark92992025-07-16 20:58
    PCoA ordination of beta diversity along with genera and other environmental factors?
  • Issue#12918706942492024-12-28 03:40
    How do I get the same color as the species map ?
  • Issue#128Laxmi00012024-12-24 13:21
    Error in seq_len: argument must be coercible to non-negative integer
  • Issue#124altuda2024-09-15 18:33
    alpha index statistics
  • Issue comment#113xiangpin2024-07-29 02:16
    Possible to calculate diff_analysis with less than 5 sample per group ?
  • Issue comment#113jianlingfan2024-07-27 05:53
    Possible to calculate diff_analysis with less than 5 sample per group ?
  • Issue#123scoob242024-07-24 01:49
    Issue in ggdiffclade

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 20 stars here means stars gained during the window, not the repo's star count.