:christmas_tree:Visualization and annotation of phylogenetic trees
active 2023-08-15 → 2026-05-20 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1010 days from 2023-08-15 to 2026-05-20. Pushes: 42 total, peak 4 in a day. Pull requests: 19 total, peak 2 in a day. Issues: 95 total, peak 4 in a day. Comments: 124 total, peak 4 in a day. Stars: 159 total, peak 4 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| GuangchuangYu | 69 | 42 | 7 | 12 |
| xiangpin | 19 | 0 | 7 | 12 |
| brj1 | 14 | 0 | 0 | 13 |
| glitchheadgit | 8 | 0 | 0 | 2 |
| drdna | 6 | 0 | 0 | 3 |
| Edouard94 | 5 | 0 | 0 | 2 |
| dr-budd | 4 | 0 | 0 | 2 |
| nelsonruth11 | 4 | 0 | 0 | 2 |
| WXwangxia | 4 | 0 | 0 | 3 |
| yasche | 4 | 0 | 1 | 3 |
| SamPassmore | 4 | 0 | 0 | 2 |
| ammaraziz | 3 | 0 | 0 | 2 |
| JakoboEU | 3 | 0 | 0 | 3 |
| Puriney | 3 | 0 | 0 | 1 |
| MjelleLab | 3 | 0 | 0 | 0 |
| willgearty | 3 | 0 | 0 | 2 |
| dirtyplants | 3 | 0 | 0 | 2 |
| shenzhenzth | 3 | 0 | 0 | 2 |
| alephreish | 2 | 0 | 0 | 1 |
| clb21565 | 2 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#709aleixop2026-05-20 14:48`geom_cladelabel()`/`geom_cladelab()` are not parsing text
- Issue#699hanguojun0072026-01-16 01:56treedataList bug
- Pull request#697davidcerny2026-01-07 14:09
- Issue comment#668xiangpin2026-01-04 04:14update gheatmap to be compatible with ggplot2-4.0.0
- Issue comment#668judyssister2026-01-03 10:38update gheatmap to be compatible with ggplot2-4.0.0
- Issue comment#682GuangchuangYu2025-12-19 07:21Conversion to plotly using `ggplotly()` fails after 4.0
- Issue#690GuangchuangYu2025-12-19 07:20Suggest removing the dependency requirement ggplot2 (≥ 4.0.0)
- Issue comment#692GuangchuangYu2025-12-18 05:14fix issue of geom_taxalink because of outward argument
- Pull request#694xiangpin2025-12-18 04:37
- Pull request#693xiangpin2025-12-18 04:35
- Pull request#693xiangpin2025-12-17 11:42
- Issue#655GuangchuangYu2025-12-17 06:16`aes_()` deprecation
- Issue comment#687brj12025-12-08 22:03how to adjust position of geom_tippoint on a tree with equal_angle layout?
- Issue#689xieduo72025-12-05 07:50Can you fix the layout_dendrogram() issue, the scale is reversed
- Issue comment#686lou-campbell332025-12-01 04:58gheatmap() fails on ggplot2 4.0 because attr(p, "mapping") becomes a global aesthetic
- Issue#686xiehs2112025-11-29 15:39gheatmap() fails on ggplot2 4.0 because attr(p, "mapping") becomes a global aesthetic
- Issue comment#684brj12025-11-20 18:46Warning messages: 1: `aes_()` was deprecated in ggplot2 3.0.0. 2: In fortify(data, ...) : Arguments in `...` must be used. ✖ Problematic arguments:
- Issue#673GuangchuangYu2025-11-18 07:42warning when running write_qc_report
- Issue comment#655brj12025-11-14 19:57`aes_()` deprecation
- Issue comment#655sunta3iouxos2025-11-14 13:48`aes_()` deprecation
- Issue#681panktigosar2025-11-10 15:37ggplot2 version conflict
- Pull request#678gtuckerkellogg2025-10-30 03:32
- Issue#676joelnitta2025-10-29 02:32geom_strip breaks with aes(linetype)
- Issue#675NikoHensley2025-10-24 21:08Error in `stat_tree()`: ! Problem while converting geom to grob.
- Issue comment#675brj12025-10-24 18:41Error in `stat_tree()`: ! Problem while converting geom to grob.
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 159 stars here means stars gained during the window, not the repo's star count.