Skip to content

:shower:A Tidy Tool for Phylogenetic Tree Data Manipulation

active 2023-08-312026-04-25 (UTC)

Complete coverage26,515 / 26,515 hourly files (100%) · 2 absent upstream2023-08-152026-08-23 (UTC)
Events
58
Pushes
11
Pull requests
0
Issues
10
Stars
17
Forks
1

Activity over time

Daily event counts in the loaded window

Line chart, 969 days from 2023-08-31 to 2026-04-25. Pushes: 11 total, peak 4 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 10 total, peak 2 in a day. Comments: 19 total, peak 4 in a day. Stars: 17 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
GuangchuangYu181105
elgabbas4002
CedricMidoux3002
jasonbosch2001
KaiHsiangHu2000
john123lol2002
xiangpin1001
StickHu1000
INicolis1000
ewallace1001
harper3571001
dansmith011001
gerverska1001
kwilson621001
ashishdamania1001

Recent activity

Latest issues, pull requests and releases

  • Issue comment#10ashishdamania2025-05-15 22:15
    Conflict with phyloseq?
  • Issue comment#51jasonbosch2025-04-17 08:53
    groupClade does not function correctly on single branches
  • Issue#51jasonbosch2025-03-14 14:42
    groupClade does not function correctly on single branches
  • Issue#50KaiHsiangHu2025-02-21 04:51
    An information message when use tidytree
  • Issue comment#50GuangchuangYu2025-02-20 00:58
    An information message when use tidytree
  • Issue#50KaiHsiangHu2025-02-17 11:21
    An information message when use tidytree
  • Issue comment#47GuangchuangYu2024-12-20 01:38
    Found more than one class "phylo" in cache
  • Issue#48GuangchuangYu2024-12-20 01:35
    Found more than one class "phylo" in cache
  • Issue comment#49elgabbas2024-12-19 17:38
    Using different colours for positive and negative values in `gheatmap`
  • Issue#49elgabbas2024-12-19 17:38
    Using different colours for positive and negative values in `gheatmap`
  • Issue comment#49elgabbas2024-12-18 18:29
    Using different colours for positive and negative values in `gheatmap`
  • Issue#49elgabbas2024-12-18 18:25
    Using different colours for positive and negative values in `gheatmap`
  • Issue comment#42gerverska2024-08-17 22:01
    Tidytree update has impacted ggtree functions
  • Issue comment#48GuangchuangYu2024-08-15 09:41
    Found more than one class "phylo" in cache
  • Issue comment#47kwilson622024-08-14 21:38
    Found more than one class "phylo" in cache
  • Issue#48INicolis2024-05-01 19:45
    Found more than one class "phylo" in cache
  • Issue comment#47john123lol2024-03-23 09:28
    Found more than one class "phylo" in cache
  • Issue comment#47john123lol2024-03-23 09:26
    Found more than one class "phylo" in cache
  • Issue comment#47CedricMidoux2023-11-29 15:45
    Found more than one class "phylo" in cache
  • Issue comment#47GuangchuangYu2023-11-29 15:36
    Found more than one class "phylo" in cache
  • Issue comment#47CedricMidoux2023-11-29 15:33
    Found more than one class "phylo" in cache
  • Issue comment#47GuangchuangYu2023-11-29 13:31
    Found more than one class "phylo" in cache
  • Issue#47GuangchuangYu2023-11-29 13:30
    Found more than one class "phylo" in cache
  • Issue#47CedricMidoux2023-11-29 09:47
    Found more than one class "phylo" in cache
  • Issue comment#10harper3572023-11-28 22:04
    Conflict with phyloseq?

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 17 stars here means stars gained during the window, not the repo's star count.