Creating network representation of microbial metabolism of dietary compounds
active 2025-03-16 → 2026-06-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 458 days from 2025-03-16 to 2026-06-16. Pushes: 100 total, peak 13 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 98 total, peak 15 in a day. Comments: 2 total, peak 2 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| acolorado1 | 161 | 93 | 1 | 2 |
| github-actions[bot] | 2 | 2 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#94acolorado12026-05-29 22:08add metabolome to snakemakek workflow
- Pull request#91acolorado12026-05-28 23:52
- Issue#85acolorado12025-12-10 21:25add to graph comparison abundance calculations (e.g., bray curtis)
- Issue#80acolorado12025-10-14 22:23Neo4j integration
- Issue#83acolorado12025-10-14 22:23output CSV and report
- Issue#77acolorado12025-10-03 22:26update README
- Issue#83acolorado12025-10-02 21:34output CSV and report
- Issue#82acolorado12025-10-02 21:34create queries
- Issue#81acolorado12025-10-02 21:33how to execute from python
- Issue#80acolorado12025-10-02 21:33Neo4j integration
- Issue#79acolorado12025-10-02 20:44microbe compound reports
- Issue#77acolorado12025-09-30 17:43update README
- Issue#73acolorado12025-09-03 15:27Metabolome - add summarising output
- Issue#71acolorado12025-09-03 15:27Metabolome - adjust for directionarlity and incorporate nodes with none origin (if needed)
- Issue#73acolorado12025-08-15 20:56Metabolome - add summarising output
- Issue#70acolorado12025-08-15 20:11Whole Genome - Push new tests, new main, and new edge creation to github
- Issue#69acolorado12025-08-15 20:08Whole genome - set up warning if no KOs are found to be microbial or food in origin
- Issue#68acolorado12025-08-15 20:08Whole genome - count nodes with none origin
- Issue#69acolorado12025-08-12 17:00Whole genome - set up warning if no KOs are found to be microbial or food in origin
- Issue#68acolorado12025-08-12 16:59Whole genome - count nodes with none origin
- Issue#67acolorado12025-08-12 16:58Debugging, error handling, etc
- Issue#66acolorado12025-08-05 22:14Bug: Genome compound prediction shows Food compounds with no assoc_food
- Issue#65acolorado12025-08-05 21:52test dataframe outputs
- Issue#64acolorado12025-08-05 21:52test 3 origins in nodes are present
- Issue#63acolorado12025-08-05 21:52test boolean edge and node weights
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.