Python code to generate BEAST2 XML files
active 2023-08-29 → 2026-05-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 982 days from 2023-08-29 to 2026-05-06. Pushes: 16 total, peak 3 in a day. Pull requests: 19 total, peak 6 in a day. Issues: 10 total, peak 5 in a day. Comments: 7 total, peak 3 in a day. Stars: 8 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| m-d-grunnill | 49 | 15 | 19 | 6 |
| terrycojones | 2 | 1 | 0 | 1 |
| CamilaDuitama | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Releasem-d-grunnill2025-12-10 21:55New methods for extracting data from a xml
- Pull request#25m-d-grunnill2025-12-10 21:52
- Pull request#25m-d-grunnill2025-12-10 21:52
- Pull request#24m-d-grunnill2025-11-24 16:46
- Pull request#19m-d-grunnill2025-11-14 15:43
- Pull request#19m-d-grunnill2025-11-14 15:43
- Releasem-d-grunnill2025-08-21 19:34Times in add_rate_change_times are now sorted (descending).
- Pull request#16m-d-grunnill2025-08-21 19:30
- Pull request#15m-d-grunnill2025-08-20 20:08
- Issue#14CamilaDuitama2025-06-03 16:39Error 1017: Class could not be found when running BEAST with generated XML
- Releasem-d-grunnill2025-01-28 15:25Fixed bugs in adding an initial tree method.
- Pull request#13m-d-grunnill2025-01-28 15:24
- Pull request#13m-d-grunnill2025-01-28 15:24
- Issue comment#12m-d-grunnill2024-11-22 14:43Add scraping option for BEAST2XML./__init__
- Issue#12m-d-grunnill2024-11-22 14:40Add scraping option for BEAST2XML./__init__
- Releasem-d-grunnill2024-11-21 15:25README updated with some newer methods and add_sequences method accepts path to fasta files.
- Pull request#11m-d-grunnill2024-11-21 15:22
- Pull request#11m-d-grunnill2024-11-21 15:22
- Issue#10m-d-grunnill2024-11-21 14:56Create add_dates method or modify add_ages to convert dates to year decimals.
- Issue comment#3m-d-grunnill2024-11-20 20:49Set up auto update version for pip or conda-forge/bioconda on release
- Issue#4m-d-grunnill2024-11-20 20:48Create method for adding starting tree from .nwk file.
- Issue comment#4m-d-grunnill2024-11-20 20:48Create method for adding starting tree from .nwk file.
- Releasem-d-grunnill2024-11-20 20:42
- Pull request#9m-d-grunnill2024-11-20 20:39
- Pull request#9m-d-grunnill2024-11-20 20:39
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 8 stars here means stars gained during the window, not the repo's star count.