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Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles

active 2023-08-182026-02-19 (UTC)

Complete coverage26,443 / 26,443 hourly files (100%) · 2 absent upstream2023-08-152026-08-20 (UTC)
Events
22
Pushes
1
Pull requests
1
Issues
4
Stars
11
Forks
3

Activity over time

Daily event counts in the loaded window

Line chart, 917 days from 2023-08-18 to 2026-02-19. Pushes: 1 total, peak 1 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 4 total, peak 2 in a day. Comments: 2 total, peak 1 in a day. Stars: 11 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
HarryZhang12242000
Junxian-Josie2000
kokonech1001
aet211100
hsiaoyi05041010
bethan-mallabar-rimmer1001

Recent activity

Latest issues, pull requests and releases

  • Issue comment#17kokonech2026-01-21 07:51
    Cannot derive sufficient number of differentially expressed genes for reference
  • Issue#16Junxian-Josie2025-09-13 10:00
    Inconsistency between cell types in Nature Methods paper and reference data in package
  • Issue#16Junxian-Josie2025-09-13 09:49
    Inconsistency between cell types in Nature Methods paper and reference data in package
  • Issue comment#15bethan-mallabar-rimmer2025-04-01 14:01
    How to scale/prep scRNA data for ConstExpRef
  • Issue#14HarryZhang12242023-11-04 18:38
    adjusted beta values by cell-type fractions
  • Issue#14HarryZhang12242023-10-23 01:00
    adjusted beta values by cell-type fractions
  • Pull request#13hsiaoyi05042023-08-18 14:20

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 11 stars here means stars gained during the window, not the repo's star count.