R package for DNA methylation analysis
active 2023-08-15 → 2026-06-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1037 days from 2023-08-15 to 2026-06-16. Pushes: 30 total, peak 6 in a day. Pull requests: 13 total, peak 3 in a day. Issues: 105 total, peak 7 in a day. Comments: 136 total, peak 6 in a day. Stars: 76 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| alexg9010 | 154 | 30 | 13 | 68 |
| J-Moravec | 12 | 0 | 0 | 5 |
| Ge0rges | 11 | 0 | 0 | 5 |
| desmodus1984 | 9 | 0 | 0 | 5 |
| YuanfengZhang | 8 | 0 | 0 | 6 |
| DengEr-1993 | 8 | 0 | 0 | 6 |
| gevro | 6 | 0 | 0 | 3 |
| iranianuser | 6 | 0 | 0 | 5 |
| mirurb | 6 | 0 | 0 | 4 |
| BenTPTseng | 4 | 0 | 0 | 1 |
| leon945945 | 4 | 0 | 0 | 2 |
| Anjaligarg006 | 4 | 0 | 0 | 3 |
| Ziwei-Liu | 3 | 0 | 0 | 1 |
| GuoanQi1996 | 3 | 0 | 0 | 1 |
| Hannah1746 | 3 | 0 | 0 | 2 |
| QuietgraceH | 3 | 0 | 0 | 1 |
| LeilyR | 3 | 0 | 0 | 1 |
| SophieValk | 3 | 0 | 0 | 2 |
| RJDan | 2 | 0 | 0 | 1 |
| HuangRuocheng | 2 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#366ajneville2025-10-30 05:31When have more than one experimental group, how to assign
- Issue comment#366ajneville2025-10-30 02:43When have more than one experimental group, how to assign
- Pull request#365alexg90102025-09-07 14:13
- Issue#361alexg90102025-08-27 19:18Inquiry about getAssociationWithTSS
- Issue comment#362alexg90102025-08-03 15:59Unite() function in methylkit shows error when destrand = TRUE
- Issue comment#306jyotikat20252025-06-11 14:26error in getTargetAnnotationStats
- Issue comment#360HuangRuocheng2025-06-05 09:21Error in if (length(df) == 7 & unique(sapply(df, class)[5:7]) == "integer") { : the condition has length > 1
- Issue#360HuangRuocheng2025-06-05 06:38Error in if (length(df) == 7 & unique(sapply(df, class)[5:7]) == "integer") { : the condition has length > 1
- Issue comment#359YuanfengZhang2025-05-16 04:17Could you please add at least one functional example of providing a list of files for methylkit?
- Issue#359YuanfengZhang2025-05-16 04:17Could you please add at least one functional example of providing a list of files for methylkit?
- Issue comment#359YuanfengZhang2025-05-16 04:01Could you please add at least one functional example of providing a list of files for methylkit?
- Issue comment#359YuanfengZhang2025-05-16 04:00Could you please add at least one functional example of providing a list of files for methylkit?
- Issue comment#359YuanfengZhang2025-05-16 03:56Could you please add at least one functional example of providing a list of files for methylkit?
- Issue comment#359YuanfengZhang2025-05-16 03:54Could you please add at least one functional example of providing a list of files for methylkit?
- Issue comment#359YuanfengZhang2025-05-16 03:52Could you please add at least one functional example of providing a list of files for methylkit?
- Issue#359YuanfengZhang2025-05-16 03:51Could you please add at least one functional example of providing a list of files for methylkit?
- Issue#358alexg90102025-04-16 09:04wrong output file path is checked for existence
- Issue#357alexg90102025-04-10 19:35prevent doubling of `DT:tabix` in tabix header
- Issue comment#354J-Moravec2025-04-08 21:07Crash due to illegal memory access in `calculateDiffMeth`
- Issue#354J-Moravec2025-04-08 21:07Crash due to illegal memory access in `calculateDiffMeth`
- Issue comment#206J-Moravec2025-04-08 20:58Error when running calculateDiffMeth function
- Issue comment#354alexg90102025-04-08 07:57Crash due to illegal memory access in `calculateDiffMeth`
- Issue comment#356alexg90102025-04-08 06:32Discussion: Annotation
- Issue comment#356J-Moravec2025-04-08 02:19Discussion: Annotation
- Issue#356J-Moravec2025-04-08 02:19Discussion: Annotation
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 76 stars here means stars gained during the window, not the repo's star count.