A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
active 2023-09-15 → 2026-04-05 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 934 days from 2023-09-15 to 2026-04-05. Pushes: 60 total, peak 10 in a day. Pull requests: 6 total, peak 2 in a day. Issues: 9 total, peak 4 in a day. Comments: 23 total, peak 11 in a day. Stars: 16 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| alegiac95 | 68 | 58 | 5 | 5 |
| sourcery-ai[bot] | 13 | 0 | 1 | 11 |
| lyhoo23618-csu | 3 | 0 | 0 | 2 |
| YufeiChenGithub | 3 | 0 | 0 | 0 |
| lenachenpumc | 2 | 0 | 0 | 1 |
| dependabot[bot] | 2 | 2 | 0 | 0 |
| YCHuang0610 | 2 | 0 | 0 | 1 |
| LuuuXG | 1 | 0 | 0 | 0 |
| WangYunHong98 | 1 | 0 | 0 | 1 |
| xiaobeiLiu | 1 | 0 | 0 | 0 |
| tillandlauer | 1 | 0 | 0 | 1 |
| iamjoostjanssen | 1 | 0 | 0 | 1 |
| ShuyangNie | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#30iamjoostjanssen2025-02-25 12:18Use other parcellation atlas instead of DK atlas
- Issue comment#28tillandlauer2024-12-17 14:10Assistance Needed: Error with imt_gsea - Unexpected Keyword Argument 'perm_index
- Issue comment#28WangYunHong982024-11-09 14:54Assistance Needed: Error with imt_gsea - Unexpected Keyword Argument 'perm_index
- Issue#30ShuyangNie2024-10-27 09:01Use other parcellation atlas instead of DK atlas
- Issue#29LuuuXG2024-07-24 16:19Confusion about the results of `boot_genes` in PLS analysis
- Issue comment#27YCHuang06102024-07-04 03:55Question about the MATLAB style correlation function in genes.py
- Issue comment#27alegiac952024-07-02 12:57Question about the MATLAB style correlation function in genes.py
- Issue comment#22alegiac952024-07-02 12:52Error in Partial least square regression analysis for only cortical regions included
- Issue comment#28alegiac952024-07-02 12:51Assistance Needed: Error with imt_gsea - Unexpected Keyword Argument 'perm_index
- Issue#28xiaobeiLiu2024-07-01 05:29Assistance Needed: Error with imt_gsea - Unexpected Keyword Argument 'perm_index
- Issue#27YCHuang06102024-06-21 13:30Question about the MATLAB style correlation function in genes.py
- Issue comment#23lyhoo23618-csu2024-06-11 07:07error in running imt_gsea with geneset except 'lake' and 'pooled'
- Issue comment#25lyhoo23618-csu2024-06-11 07:03Spatial correlation in the PLS model
- Issue comment#25alegiac952024-06-10 09:44Spatial correlation in the PLS model
- Issue#25lyhoo23618-csu2024-06-07 19:03Spatial correlation in the PLS model
- Issue#24YufeiChenGithub2024-06-07 09:15error in running imt_gsea with geneset except 'lake' and 'pooled'
- Issue#24YufeiChenGithub2024-06-07 09:13error in running imt_gsea with geneset except 'lake' and 'pooled'
- Issue#23YufeiChenGithub2024-06-07 09:10error in running imt_gsea with geneset except 'lake' and 'pooled'
- Issue#22lenachenpumc2024-03-03 08:38Error in Partial least square regression analysis for only cortical regions included
- Issue comment#18alegiac952024-01-24 15:12How to debug “the process cannot access it” when running imt_gsea ?
- Issue comment#18lenachenpumc2024-01-24 11:41How to debug “the process cannot access it” when running imt_gsea ?
- Pull request#21alegiac952023-11-15 12:40
- Pull request#21alegiac952023-11-15 12:40
- Pull request#20alegiac952023-10-03 18:32
- Pull request#20sourcery-ai[bot]2023-10-03 18:29
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 16 stars here means stars gained during the window, not the repo's star count.