A pipeline for processing single-cell and spatial long-read transcriptomic data
active 2024-05-22 → 2026-04-26 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 705 days from 2024-05-22 to 2026-04-26. Pushes: 33 total, peak 4 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 3 total, peak 1 in a day. Comments: 12 total, peak 2 in a day. Stars: 4 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| andrewprzh | 39 | 31 | 0 | 8 |
| ChangqingW | 3 | 0 | 0 | 2 |
| xyz202310 | 3 | 0 | 0 | 2 |
| github-actions[bot] | 2 | 2 | 0 | 0 |
| dawangran | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#9andrewprzh2026-03-09 11:00Spl-IsoQuant with 10x 3' v4 single-cell
- Issue comment#8ChangqingW2026-02-20 10:28Transcirpt counts and gene counts from curio
- Issue comment#8andrewprzh2026-02-20 10:26Transcirpt counts and gene counts from curio
- Issue comment#6andrewprzh2026-02-12 11:36Extreme memory usage (>800G and rising) in Spl-IsoQuant v2.2.0 during StereoSeq nanopore barcode calling (428M+ barcodes)
- Issue#7ChangqingW2026-02-11 05:14Test failed after update
- Issue comment#7ChangqingW2026-02-09 10:44Test failed after update
- Releaseandrewprzh2026-02-06 21:21Spl-IsoQuant 2.2
- Issue comment#6andrewprzh2026-01-12 18:52Extreme memory usage (>800G and rising) in Spl-IsoQuant v2.2.0 during StereoSeq nanopore barcode calling (428M+ barcodes)
- Issue comment#4xyz2023102025-10-17 15:58splisoformquant.py --test failed
- Issue comment#4andrewprzh2025-10-17 14:53splisoformquant.py --test failed
- Issue comment#1xyz2023102025-10-02 13:32Can spl-IsoQuant be used for 10x visium+ONT data?
- Issue comment#1andrewprzh2025-10-02 12:55Can spl-IsoQuant be used for 10x visium+ONT data?
- Issue comment#2andrewprzh2025-09-21 22:50Assistance Needed: Generating the model.gtf File
- Issue#2dawangran2025-09-17 03:02Assistance Needed: Generating the model.gtf File
- Issue comment#1andrewprzh2025-09-16 18:27Can spl-IsoQuant be used for 10x visium+ONT data?
- Issue#1xyz2023102025-09-15 05:17Can spl-IsoQuant be used for 10x visium+ONT data?
- Releaseandrewprzh2025-06-19 13:13Spl-IsoQuant 2.0
- Releaseandrewprzh2025-05-30 11:51Spl-IsoQuant
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 4 stars here means stars gained during the window, not the repo's star count.