Analysis pipeline that leverages a database of conserved eukaryotic genes to identify eukaryotes present in metagenomic sequencing
active 2023-10-13 → 2026-07-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1008 days from 2023-10-13 to 2026-07-16. Pushes: 41 total, peak 11 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 11 total, peak 2 in a day. Comments: 10 total, peak 2 in a day. Stars: 17 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| allind | 48 | 41 | 0 | 4 |
| arfaiq | 3 | 0 | 0 | 1 |
| ailtonpcf | 3 | 0 | 0 | 2 |
| tiantianlili | 2 | 0 | 0 | 0 |
| zijia20 | 1 | 0 | 0 | 1 |
| sarpiens | 1 | 0 | 0 | 0 |
| qkqk-hub | 1 | 0 | 0 | 0 |
| felipemrb | 1 | 0 | 0 | 0 |
| mr2raccoon | 1 | 0 | 0 | 1 |
| mruehlemann | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#54mruehlemann2026-05-15 10:53cgi not avialable for recent python versions
- Releaseallind2026-04-03 20:58EukDetect 2.0.0
- Releaseallind2026-04-03 20:35EukDetect 2.0.0
- Issue#52allind2025-07-02 15:03FAILED python tests/test_eukdetect.py
- Issue comment#51mr2raccoon2025-07-01 13:24Assistance with Verifying Eukdetect Results
- Issue comment#51zijia202025-05-19 11:42Assistance with Verifying Eukdetect Results
- Issue#51felipemrb2024-12-06 07:45Assistance with Verifying Eukdetect Results
- Issue comment#50ailtonpcf2024-07-15 09:45invalid escape sequence '\d' on get_uncomputed_taxid_per_busco
- Issue comment#50ailtonpcf2024-07-11 12:09invalid escape sequence '\d' on get_uncomputed_taxid_per_busco
- Issue comment#50allind2024-07-01 20:46invalid escape sequence '\d' on get_uncomputed_taxid_per_busco
- Issue#49ailtonpcf2024-06-06 13:50eukdetect-db failing at bedtools getfasta
- Issue comment#48allind2024-04-23 12:54How do you classify the fasta genome
- Issue#48allind2024-04-23 12:54How do you classify the fasta genome
- Issue#48qkqk-hub2024-04-23 06:29How do you classify the fasta genome
- Issue#47arfaiq2024-02-08 15:33Error in config file
- Issue comment#47arfaiq2024-02-08 15:33Error in config file
- Issue comment#47allind2024-02-08 13:07Error in config file
- Issue#47arfaiq2024-02-08 00:06Error in config file
- Issue comment#46allind2024-01-10 18:24Fastq PAIRED Doubt
- Issue#46allind2024-01-10 18:23Fastq PAIRED Doubt
- Issue#46sarpiens2024-01-09 11:05Fastq PAIRED Doubt
- Issue#45tiantianlili2023-10-14 01:05errors in test_eukdetect.py
- Issue#45tiantianlili2023-10-13 09:38errors in test_eukdetect.py
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 17 stars here means stars gained during the window, not the repo's star count.