active 2023-08-29 → 2025-06-05 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 647 days from 2023-08-29 to 2025-06-05. Pushes: 7 total, peak 4 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 17 total, peak 3 in a day. Comments: 19 total, peak 4 in a day. Stars: 10 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| ay-lab | 17 | 7 | 0 | 10 |
| dmuliaditan | 3 | 0 | 0 | 1 |
| zhangylab | 3 | 0 | 0 | 0 |
| koushik20 | 3 | 0 | 0 | 1 |
| remeseirogrp | 3 | 0 | 0 | 2 |
| nyuhic | 2 | 0 | 0 | 1 |
| mb0yce | 1 | 0 | 0 | 1 |
| souryacs | 1 | 0 | 0 | 1 |
| danidigi | 1 | 0 | 0 | 1 |
| EASS132 | 1 | 0 | 0 | 0 |
| hd931 | 1 | 0 | 0 | 0 |
| SplitInf | 1 | 0 | 0 | 1 |
| hugch2020 | 1 | 0 | 0 | 0 |
| helenhuangmath | 1 | 0 | 0 | 0 |
| Gemma-Zhang-326 | 1 | 0 | 0 | 0 |
| roniweiss12 | 1 | 0 | 0 | 0 |
| yxralba088 | 1 | 0 | 0 | 0 |
| xiasijian | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#111xiasijian2025-06-05 06:40bedToBigBed version for FitHiChIP
- Issue#110EASS1322025-04-20 22:52Can batch be added to differential analysis design?
- Issue comment#108ay-lab2025-04-10 07:30Could FitHiChIP merge loops between different biological replicates?
- Issue comment#107mb0yce2025-03-06 11:04cat: /volumes/easystore/HiChIP_CTCF/Matrix_BinSize5000/sample.interactions.initial.bed: No such file or directory - FitHiChIP is quiting
- Issue#107hd9312024-07-23 03:33cat: /volumes/easystore/HiChIP_CTCF/Matrix_BinSize5000/sample.interactions.initial.bed: No such file or directory - FitHiChIP is quiting
- Issue comment#62SplitInf2024-07-19 04:50Is there a way to visualize the arcs plot in IGV?
- Issue#106yxralba0882024-06-12 12:25FitHiChIP_Singularity.sh ERROR
- Issue comment#91danidigi2024-06-11 10:45Running FitHiChIP error for .hic data
- Issue comment#105ay-lab2024-03-08 01:36Differential loop analysis
- Issue comment#103ay-lab2024-03-08 01:28An easy way to get the whole genome expected interaction matrix
- Issue comment#102ay-lab2024-03-08 01:27Error in .compressOffsets(y, offset = offset) : offsets must be finite values Calls: ApplyEdgeR -> exactTest -> mglmOneGroup -> .compressOffsets
- Issue comment#104ay-lab2024-03-08 01:22FitHiChIP requests different input than specified in documentation
- Issue#105helenhuangmath2024-02-29 18:10Differential loop analysis
- Issue#104roniweiss122024-02-04 15:20FitHiChIP requests different input than specified in documentation
- Issue#103zhangylab2023-12-18 10:53An easy way to get the whole genome expected interaction matrix
- Issue#103zhangylab2023-12-18 10:51An easy way to get the whole genome expected interaction matrix
- Issue#103zhangylab2023-12-18 10:51An easy way to get the whole genome expected interaction matrix
- Issue#102Gemma-Zhang-3262023-11-17 15:27Error in .compressOffsets(y, offset = offset) : offsets must be finite values Calls: ApplyEdgeR -> exactTest -> mglmOneGroup -> .compressOffsets
- Issue comment#101remeseirogrp2023-11-15 15:31How to get common loops between two samples
- Issue comment#101remeseirogrp2023-11-10 07:26How to get common loops between two samples
- Issue comment#101souryacs2023-11-09 23:54How to get common loops between two samples
- Issue#101remeseirogrp2023-11-08 17:03How to get common loops between two samples
- Issue comment#100ay-lab2023-11-03 20:12option to fragment interactions?
- Issue#100hugch20202023-11-01 05:28option to fragment interactions?
- Issue#99nyuhic2023-10-05 07:01Should input cool files be balanced/normalized?
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 10 stars here means stars gained during the window, not the repo's star count.