general purpose library for evaluating the likelihood of sequence evolution on trees
active 2024-06-04 → 2026-07-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 763 days from 2024-06-04 to 2026-07-06. Pushes: 108 total, peak 12 in a day. Pull requests: 8 total, peak 2 in a day. Issues: 9 total, peak 3 in a day. Comments: 22 total, peak 4 in a day. Stars: 11 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| msuchard | 88 | 85 | 0 | 1 |
| yucais | 16 | 16 | 0 | 0 |
| bredelings | 15 | 0 | 4 | 10 |
| xji3 | 12 | 1 | 3 | 3 |
| gkarthik | 5 | 5 | 0 | 0 |
| NilaBlueshirt | 3 | 0 | 0 | 3 |
| MJ720720 | 2 | 0 | 0 | 1 |
| synthiiiii | 2 | 0 | 0 | 0 |
| mlzhangli | 2 | 0 | 0 | 2 |
| alexeid | 1 | 0 | 1 | 0 |
| koadman | 1 | 0 | 0 | 1 |
| GuyBaele | 1 | 1 | 0 | 0 |
| minghao-du | 1 | 0 | 0 | 0 |
| zcalamari | 1 | 0 | 0 | 1 |
| pathogen-detection | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#241alexeid2026-05-14 22:42
- Issue comment#240msuchard2026-03-27 00:23beagle.jar as modularised maven artifact?
- Issue#240msuchard2026-03-27 00:23beagle.jar as modularised maven artifact?
- Issue#239MJ7207202026-01-24 21:04Question about very little GPU usage
- Issue comment#123MJ7207202026-01-24 20:56Slow Performance issue with GPUs
- Issue#237synthiiiii2025-11-09 08:23Failed to load BEAGLE library: no hmsbeagle-jni in java.library.path:
- Issue#237synthiiiii2025-11-09 08:02Failed to load BEAGLE library: no hmsbeagle-jni in java.library.path:
- Issue#236minghao-du2025-10-01 08:13Question about byPartition = false in updatePrePartials
- Pull request#234xji32025-09-08 15:39
- Pull request#234bredelings2025-09-08 14:29
- Pull request#230xji32025-08-24 19:46
- Pull request#233bredelings2025-08-23 00:42
- Pull request#232bredelings2025-08-23 00:25
- Issue comment#230bredelings2025-08-22 13:30Multi-threaded derivative
- Issue comment#230bredelings2025-08-21 01:54Multi-threaded derivative
- Issue comment#230bredelings2025-08-21 01:54Multi-threaded derivative
- Issue comment#230bredelings2025-08-20 21:55Multi-threaded derivative
- Issue comment#230bredelings2025-08-20 01:18Multi-threaded derivative
- Issue comment#230bredelings2025-08-19 16:51Multi-threaded derivative
- Issue comment#230bredelings2025-08-19 16:41Multi-threaded derivative
- Issue comment#230bredelings2025-08-19 16:07Multi-threaded derivative
- Pull request#230bredelings2025-08-19 15:25
- Pull request#229xji32025-08-18 16:06
- Issue comment#229bredelings2025-08-12 17:25Don't make the last partition extra-big.
- Issue comment#228koadman2025-03-26 02:02Using Beagle with and without GPU
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 11 stars here means stars gained during the window, not the repo's star count.